Job Description P23325 Confidence 99.88% Date Thu Jan 5 11:39:22 GMT 2012 Rank 35 Aligned Residues 170 % Identity 14% Template c3jueA_ PDB info PDB header:protein transport/endocytosis Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain- PDBTitle: crystal structure of arfgap and ank repeat domain of acap1 Resolution 2.30 Å

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		477	.	.	480	.			.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.				.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.												.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure							.	.																							.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																							.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	S	H	V	.	.	L	Y	H	V	M	A	N	G	D	A	D	M	L	K	I	V	L	N	A	L	P	L	.	.	.	L	I	R	T	C	H	L	T	K	E	Q	V	L	D	L	L	K	A	K	.	.	.	.	.	.	.	.	.	.	.	D	F	Y	G	C	P	G	L	Y	L	A	M	Q	N	G	H	S	D
Query Conservation							.	.																							.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																							.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	W	E	P	E	L	V	K	L	M	C	E	L	G	N	V	I	I	N	Q	I	Y	E	A	R	V	E	A	M	A	V	K	K	P	G	P	S	C	S	R	Q	E	K	E	A	W	I	H	A	K	Y	V	E	K	K	F	L	T	K	L	P	L	H	P	G	A	L	L	F	R	A	S	G	H	P	P	S	L	P
Template Known Secondary structure		S													S										T	T	T	T	T	T	T	T						T	T	S														T	S		T	T			S													T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	K	V	I	L	E	A	L	P	S	L	A	Q	E	I	N	I	S	A	S	D	I	V	D	L	L	T	A	K	S	L	A	R	D	T	G	L	F	M	A	M	Q	R	G	H	M	N	V	I	N	T	I	F	N	A	L	P	T	L	F	N	T	F	K	F	D	K	K	N	M	K	P	L	L	L	A	N	N	S
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	M	A	D	A	L	A	H	G	A	D	V	N	W	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Q	D	N	A	T	P	L	I	Q	A	T	A	A	N	S	L	L	A	C	E	F	L	L	Q	N	G	A	N	V	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	S
Template Known Secondary structure									T	T			T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T											T	T											T	T			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.														.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.																.	.	.
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	Y	P	G	L	F	S	A	I	Q	H	K	Q	Q	N	V	V	E	T	V	Y	L	A	L	S	D	H	A	R	L	F	G	F	T	A	E	D	I	M	D	F	W	Q	H	K	A	P	Q	K	Y	S	A	F	E	L	A	F	E	F	G	H	R	V	I	A	E	L	I
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	R	G	P	L	H	H	A	T	I	L	G	H	T	G	L	A	C	L	F	L	K	R	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	R	D	S	E	G	R	D	P	L	T	I	A	M	E	T	A	N	A	D	I	V	T	L	L
Template Known Secondary structure		T	S											T											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				T	T	S										T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.																.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions