Job Description P23325 Confidence 99.93% Date Thu Jan 5 11:39:22 GMT 2012 Rank 26 Aligned Residues 187 % Identity 13% Template c2vgeA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rela-associated inhibitor; PDBTitle: crystal structure of the c-terminal region of human iaspp Resolution 2.10 Å

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		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	F	S	G	L	F	L	A	I	S	R	K	D	K	N	V	V	T	S	I	L	N	A	L	P	K	L	A	A	T	H	H	L	D	N	E	Q	V	Y	K	F	L	S	A	K	N	R	T	S	S	H	V	L	Y	H	V	M	A	N	G	D	A	D	M	L	K	I	V	L	N	A	L	P	L	L	I	R	T	C
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Sequence		N	P	L	V	L	L	L	D	A	A	L	T	G	E	L	E	V	V	Q	Q	A	V	K	E	M	N	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	P	N	E	E	G	I	T	A	L	H	N	A	I	C	G	A	N	Y	S	I	V	D	F	L	I	T	A	G	A	N	.	.	.	.	.
Template Known Secondary structure														T												S	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T	S										T	T											T	T			.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template SS confidence
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.																.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		H	L	T	K	E	Q	V	L	D	L	L	K	A	K	D	F	Y	G	C	P	G	L	Y	L	A	M	Q	N	G	H	S	D	I	V	K	V	I	L	E	A	L	P	S	L	A	Q	E	I	N	I	S	A	S	D	I	V	D	L	L	T	A	K	S	L	A	R	D	T	G	L	F	M	A	M	Q	.	.	R	G	H
Query Conservation																																																																													.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	N	S	P	D	S	H	G	W	T	P	L	H	C	A	A	S	C	N	D	T	V	I	C	M	A	L	V	Q	H	G	A	A	I	F	A	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	D	G	A	T	A	F	E	K	C	D	P	Y	R	E	G	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T				T	T											T	T										T	T	T			T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T			T	G	G	G			T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.															.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	V	I	N	T	I	F	N	A	L	P	T	L	F	N	T	F	K	F	D	K	K	N	M	K	P	L	L	L	A	N	N	S	N	E	Y	P	G	L	F	S	A	I	Q	H	K	Q	Q	N	V	V	E	T	V	Y	L	A	L	S	D	H	A	R	L	F	G	F	T	A	E	D	I	M	D	F	W	Q	H	K
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	C	A	T	Y	L	A	D	V	E	Q	S	M	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	N	S	G	A	V	Y	A	L	W	D	Y	S	A	E	F	G	D	E	L	S	F	R	E	G	E	.	.	.	.	.	.	.	.	.	.	.	.	S	V	T	V	L	R	R
Template Known Secondary structure															T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G					S	S		B			S	S	T	T	B			B		T	T		.	.	.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		742	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.																				.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.													.	.	.	.	.	.	790
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.		.	.	.	690
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	P	Q	K	Y	S	A	F	E	L	A	F	E	F	G	H	R	V	I	A	.	E	L	I	L
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		D	G	P	E	E	T	D	W	W	W	A	A	L	H	G	Q	E	G	Y	V	P	R	N	Y	F
Template Known Secondary structure		S		T	T		S	S							T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		791	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions