Job Description P23325 Confidence 99.78% Date Thu Jan 5 11:39:22 GMT 2012 Rank 51 Aligned Residues 123 % Identity 20% Template c2jabC_ PDB info PDB header:de novo protein Chain: C: PDB Molecule:h10-2-g3; PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2 Resolution 1.70 Å

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		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	G	C	P	G	L	Y	L	A	M	Q	N	G	H	S	D	I	V	K	V	I	L	E	A	L	P	S	L	A	Q	E	I	N	I	S	A	S	D	I	V	D	L	L	T	A	K	S	L	A	R	D	T	G	L	F	M	A	M	Q	R	G	H	M	N	V	I	N	T	I	F	N	A	L	P	T	L	F	N	T
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		S	D	L	G	K	K	L	L	E	A	A	R	A	G	Q	D	D	E	V	R	I	L	M	A	N	G	A	D	V	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	E	Y	G	L	T	P	L	Y	L	A	T	A	H	G	H	L	E	I	V	E	V	L	L	K	N	G	A	D	V	N	A	.
Template Known Secondary structure															T											T	T			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S											T											T	T			T	T		.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	F	D	K	K	N	M	K	P	L	L	L	A	N	N	S	N	E	Y	P	G	L	F	S	A	I	Q	H	K	Q	Q	N	V	V	E	T	V	Y	L	A	L	S	D	H	A	R	L	F	G	F	T	A	E	D	I	M	D	F	W	Q	H	K	A	P	Q	K	Y	S	A	F	E	L	A	F	E	F	G	H	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	I	G	F	T	P	L	H	L	A	A	F	I	G	H	L	E	I	A	E	V	L	L	K	H	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	A	Q	D	K	F	G	K	T	A	F	D	I	S	I	G	N	G	N	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T												T											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				T	T	S										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		684	.	.	.	.	.	690	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	E	L	I	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	A	E	I	L	Q	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions