Job Description P23325 Confidence 99.87% Date Thu Jan 5 11:39:22 GMT 2012 Rank 37 Aligned Residues 171 % Identity 19% Template c2b0oF_ PDB info PDB header:metal binding protein Chain: F: PDB Molecule:uplc1; PDBTitle: crystal structure of uplc1 gap domain Resolution 2.06 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.											.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	N	S	I	N	L	P	G	L	Y	L	A	I	N	Y	G	N	A	D	I	V	E	T	I	F	N	S	L	S	E	T	G	Y	E	G	L	L	S	K	K	N	L	M	H	I	L	E	A	.	.	.	.	.	.	.	.	.	.	K	D	K	N	G	F	S	G	L	F	L	A	I	S	R	K	D	K	N	V	V	T
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	L	L	G	P	S	E	L	L	L	A	L	N	M	G	N	T	S	F	N	E	V	M	E	A	Q	L	P	S	H	G	G	P	K	P	S	A	E	S	D	M	G	T	R	R	D	Y	I	M	A	K	Y	V	E	H	R	F	A	R	R	C	T	P	Q	R	L	W	T	A	I	C	N	R	D	L	L	S	V	L
Template Known Secondary structure		T	S				G	G	G	G																T	T	T	S		T	T		T	T				T	T															T	S		T	T	S															T
Template Predicted Secondary structure
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490				.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		S	I	L	N	A	L	P	K	L	A	A	T	H	H	L	D	N	E	Q	V	Y	K	F	L	S	A	K	N	R	T	S	S	H	V	L	Y	H	V	M	A	N	G	D	.	.	.	A	D	M	L	K	I	V	L	N	A	L	P	L	L	I	R	T	C	H	L	T	K	E	Q	V	L	D	L	L	K	A	K	D	F
Query Conservation																																													.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	F	A	N	G	Q	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	P	L	P	G	E	E	L	V	L	H	L	A	V	K	V	A	N	Q	A	S	L	P	L	V	D	F	I	I	Q	N	G	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	K	A	A
Template Known Secondary structure						T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		B				B									T			G	G	G												S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		565	.	.	.	.	570	.	.	.																.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.																.	610	.	.	.	.
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	C	P	G	L	Y	L	A	M	Q	N	G	H	S	D	I	V	K	V	I	L	E	A	L	P	S	L	A	Q	E	I	N	I	S	A	S	D	I	V	D	L	L	T	A	K	S	L	A	R	D	T	G	L	F	M	A	M	Q	R	G	H	M	N	V	I	N	T	I
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	N	T	A	L	H	Y	A	A	L	Y	N	Q	P	D	C	L	K	L	L	L	K	G	R	A	L	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	N	E	A	G	E	T	A	L	D	I	A	R	K	K	H	H	K	E	C	E	E	L	L
Template Known Secondary structure		T											T	T											T	T				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S											T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.																650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions