Job Description P02942 Confidence 20.55% Date Thu Jan 5 10:57:47 GMT 2012 Rank 37 Aligned Residues 108 % Identity 11% Template d1eq1a_ SCOP info Apolipophorin-III Apolipophorin-III Apolipophorin-III Resolution UNK

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		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.											.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		V	R	N	L	A	Q	R	S	A	Q	A	A	R	E	I	K	S	L	I	E	D	S	V	.	.	.	.	.	.	.	.	.	.	G	K	V	D	V	G	S	T	L	V	E	S	A	G	E	T	M	A	E	I	V	S	A	.	V	T	R	V	T	D	I	M	G	E	I	A	S	A	S	D	E	Q	S	R	G	I	D
Query Conservation																									.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		F	E	E	M	E	K	H	A	K	E	F	Q	K	T	F	S	E	Q	F	N	S	L	V	N	S	K	N	T	Q	D	F	N	K	A	L	K	D	G	S	D	S	V	L	Q	Q	L	S	A	F	S	S	S	L	Q	G	A	I	S	D	A	N	G	K	A	K	E	A	L	E	Q	A	R	Q	N	V	E	K	T	A	E
Template Known Secondary structure		S	T																					T	S	S			S	S		S	S																										T	T		S	S	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	G	L	A	V	A	E	M	D	R	V	T	Q	Q	N	A	A	L	V	E	E	S	A	A	A	A	A	A	L	E	E	Q	A	S	R	L	T	E	A	V	A
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		E	L	R	K	A	H	P	D	V	E	K	E	A	N	.	.	.	A	F	K	D	K	L	Q	A	A	V	Q	T	T	V	Q	E	S	Q	K	L	A	K	E	V	A
Template Known Secondary structure		G	G	G	G		S						T		S	.	.	.	S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions