Job Description P14407 Confidence 17.41% Date Thu Jan 5 11:34:03 GMT 2012 Rank 37 Aligned Residues 114 % Identity 17% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.				.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		R	D	I	A	H	A	K	L	K	E	L	I	D	A	G	K	E	L	P	Q	Y	I	K	D	H	P	I	Y	Y	A	G	P	A	K	T	P	A	G	Y	P	S	G	S	L	G	P	T	T	A	G	R	.	.	.	M	D	S	Y	V	D	L	L	Q	S	H	G	G	S	M	I	M	L	A	K	G	N	R	S	Q	Q
Query Conservation																																																					.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	T	V	Y	E	A	L	K	E	A	L	G	G	E	A	R	L	P	V	L	K	D	R	N	L	W	F	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	Q	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A
Template Known Secondary structure													T	T	S	S								S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S	S														T	T	T											S	S	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.															.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		470	.	.	.	.	.	.	.	.	.						480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		V	T	D	A	C	H	K	H	G	G	.	.	.	.	.	F	Y	L	G	S	I	G	G	P	A	A	V	L	A	Q	Q	S	I	K	H	L	E	C	V	A	Y	P	E	L	G	M	E	A	I	W	K	I	E	V	E	D	F	P	A	F	I	L	V	D	D	K	G	N	D	F	F	Q	Q
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	L	V	D	T	A	G	R	L	Q	I	D	E
Template Known Secondary structure														T								T	T																	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																		.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions