Return to main results Retrieve Phyre Job Id

Job DescriptionP14407
Confidence28.28%DateThu Jan 5 11:34:03 GMT 2012
Rank15Aligned Residues50
% Identity12%Templatec2e0iD_
PDB info PDB header:lyaseChain: D: PDB Molecule:432aa long hypothetical deoxyribodipyrimidine photolyase; PDBTitle: crystal structure of archaeal photolyase from sulfolobus tokodaii with2 two fad molecules: implication of a novel light-harvesting cofactor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   329330.........340. ........350.........360 .........370........
Predicted Secondary structure 





....








.




Query SS confidence 












. . . .


















.

















Query Sequence  NREGIWIEKLEHN. . . . PGQYIPQELRQAGEGEAVK. VDLNRPMKEILAQLSQYP
Query Conservation    

  
  
   ....                   .
 
  
  
  
 
 


Alig confidence 












....


















.

















Template Conservation 

 
 


 




   
   

 
       

 



                
Template Sequence  DPEAKFIKEWVEELKDVPPSIIHSIYKTKVPGYPSPIVNWLERVNYVKSEYKNVK
Template Known Secondary structure 
TT

GGGGSS
TTTTTS

TTS


SS
Template Predicted Secondary structure 



























Template SS confidence 






















































   375....380.........390.........400.........410.........420.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions