Job Description P07363 Confidence 98.69% Date Thu Jan 5 11:00:16 GMT 2012 Rank 44 Aligned Residues 93 % Identity 22% Template c3na3A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:dna mismatch repair protein mlh1; PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens Resolution 2.50 Å

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		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	D	P	L	T	H	L	V	R	N	S	L	D	H	G	I	E	L	P	E	K	R	L	A	A	G	K	N	S	V	G	N	L	I	L	S	A	E	H	Q	G	G	N	I	C	I	E	V	T	D	D	G	A	G	L	N	R	E	R	I	L	A	K	A	A	S	Q	G	L	T	V	S	E	N	M	S	D	D	E
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	N	A	I	K	E	M	I	E	N	C	L	D	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	S	I	Q	V	I	V	K	E	G	G	L	K	.	L	I	Q	I	Q	D	N	G	T	G	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E
Template Known Secondary structure																T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								G	G	G	T	S	.								S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.															.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.																						70	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.		.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		V	A	M	L	I	F	A	P	G	F	S	T	A	E	Q	V	T	D	V	S	G	R	G	V	G	M	D	V	V	K	R	N	I	Q	K	M	G	G	H	V	E	I	Q	S	K	.	Q	G	T	G	T	T	I	R	I	L	L
Query Conservation																																															.
Alig confidence															.	.																		.	.	.	.	.									.
Template Conservation															.	.																		.	.	.	.	.
Template Sequence		D	L	D	I	V	C	E	R	F	T	T	S	K	.	.	L	Q	S	F	G	F	R	G	E	A	L	A	S	I	S	H	V	.	.	.	.	.	A	H	V	T	I	T	T	K	T	A	D	G	K	C	A	Y	R	A	S	Y
Template Known Secondary structure		G	G	G	T	T	T	S	T	T			S	S	.	.							T	T									S	.	.	.	.	.	S									T	T		S	S
Template Predicted Secondary structure															.	.																		.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions