Job Description P07363 Confidence 100.00% Date Thu Jan 5 11:00:16 GMT 2012 Rank 5 Aligned Residues 278 % Identity 12% Template c3d2rB_ PDB info PDB header:transferase Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp Resolution 2.03 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	D	I	T	A	V	L	C	F	V	I	E	A	D	Q	I	T	F	E	T	V	E	V	S	P	K	I	S	T	P	P	V	L	K	L	A	A	E	Q	A	P	T	G	R	V	E	R	E	K	T	T	R	S	N	E	S	T	S	I	R	V	A	V	E	K	V	D	Q	L	I	N	L	V	G	E	L	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	F	L	R	Q	E	L	P	V	R	L	A	N	I	L	K	E	I	D	I	L	P	T	Q	L	V	N	T	S	S	V	Q	L	V	K	S	W	Y	I	Q	S	L	M	D	L	V	E	F	H	E	K	S	P	D	D	Q	K	A	L	S	D	F	V	D	T	L	I	K	V	R	N	R	H	H	N	V	V	P	T
Template Known Secondary structure																						T	S						T	S																			G	G	G	G	S		T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		284	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.																.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	S	M	L	A	Q	R	.	.	.	.	.	S	S	E	L	D	P	V	N	H	G	D	L	I	T	S	M	G	Q	L	Q	R	N	A	R	D	L	Q	E	S	V	M	S	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M	P	M	E	Y	V	F	S	R	Y	P	R	L	V	R	D	L
Query Conservation										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	Q	G	I	I	E	Y	K	A	C	T	V	D	P	V	T	N	Q	N	L	Q	Y	F	L	D	R	F	Y	M	N	R	I	S	T	R	M	L	M	N	Q	H	I	L	I	F	S	D	S	Q	T	G	N	P	S	H	I	G	S	I	D	P	N	C	D	V	V	A	V	V	Q	D	A	F	E	C	S	R	M	L
Template Known Secondary structure																T	T	T																															S	S					T	T	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		344	.	.	.								.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.
Query Sequence		A	G	K	L	.	.	.	.	.	.	.	G	K	Q	V	E	L	T	L	V	G	S	S	T	E	L	D	K	S	L	I	E	R	I	I	D	P	L	T	H	L	V	R	N	S	L	D	H	G	I	E	L	P	E	K	R	L	A	A	G	K	N	S	V	G	N	L	I	L	S	A	E	H	Q	G	G	N	I	C	I
Query Conservation						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation																																																							.	.	.	.	.
Template Sequence		C	D	Q	Y	Y	L	S	S	P	E	L	K	L	T	Q	V	N	G	K	F	P	D	Q	P	I	H	I	V	Y	V	P	S	H	L	H	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	H	Q	.	.	.	.	.	E	N	Q	P	S	L	T	P	I	E	V	I	V	V	L	G	K	E	D	L	T	I
Template Known Secondary structure							S												S	S	S	T	T	S																														T	.	.	.	.	.	T	T	S	S	S												S	S
Template Predicted Secondary structure																																																							.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	T	D	D	G	A	G	L	N	R	E	R	I	L	A	K	A	A	S	Q	G	L	T	V	S	E	N	M	S	D	D	E	V	A	M	L	I	F	A	P	G	F	S	T	A	E	Q	V	T	D	V	S	G	R	G	V	G	M	D	V	V	K	R	N	I	Q	K	M	G	G	H	V	E	I	Q	S	K	Q	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		K	I	S	D	R	G	G	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	I	I	D	R	L	F	S	Y	T	Y	S	T	A	P	.	T	P	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	N	L	Y	S	L	S	G
Template Known Secondary structure							S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T	G	G	G	S	T	T			S	S		.					S	S	S														T	T									T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.																						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	T	T	I	R	I	L	L	P	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	T	D	A	I	I	Y	L	K	A	L
Template Known Secondary structure		T										S	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions