Job Description P07363 Confidence 47.79% Date Thu Jan 5 11:00:16 GMT 2012 Rank 91 Aligned Residues 109 % Identity 14% Template c3ck6E_ PDB info PDB header:structural protein Chain: E: PDB Molecule:putative membrane transport protein; PDBTitle: crystal structure of zntb cytoplasmic domain from vibrio2 parahaemolyticus rimd 2210633 Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	D	F	Y	Q	T	F	F	D	E	A	D	E	L	L	A	D	M	E	Q	H	L	L	V	L	Q	P	E	A	P	D	A	E	Q	L	N	A	I	F	R	A	A	H	S	I	K	G	G	A	G	T	F	G	F	S	V	L	Q	E	T	T	H	L	M	E	N	L	L	D	E	A	R	R	G	E	M	Q	L	N
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	Q	I	I	E	G	L	N	G	K	I	D	L	Y	L	D	T	I	E	E	T	L	N	E	F	D	V	N	D	E	S	T	Y	N	H	I	A	A	Q	K	A	L	I	S	I	K	.	.	.	.	.	.	.	.	.	.	.	.	R	F	I	R	P	Q	Q	Y	A	I	R	D	L	I	E	S	E	S	E	L	V
Template Known Secondary structure																										T			T	T		G	G	G															.	.	.	.	.	.	.	.	.	.	.	.																T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.													.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	I	I	N	L	F	L	E	T	K	D	I	M	Q	E	Q	L	D	A	Y	K	Q	S	Q	E	P	D	A	A	S	F	D	Y	I	C	Q	A	L	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	R	P	H	Q	Y	R	F	A	H	N	N	I	T	R	I	N	E	T	I	E	F	Y	L	G	E	V	A	L	F	Q	D	E	I	K	H	N	R	D	E
Template Known Secondary structure			T	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions