Job Description P07363 Confidence 100.00% Date Thu Jan 5 11:00:16 GMT 2012 Rank 1 Aligned Residues 316 % Identity 44% Template c2ch4A_ PDB info PDB header:transferase/chemotaxis Chain: A: PDB Molecule:chemotaxis protein chea; PDBTitle: complex between bacterial chemotaxis histidine kinase chea2 domains p4 and p5 and receptor-adaptor protein chew Resolution 3.5 Å

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		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	M	M	P	M	E	Y	V	F	S	R	Y	P	R	L	V	R	D	L	A	G	K	L	G	K	Q	V	E	L	T	L	V	G	S	S	T	E	L	D	K	S	L	I	E	R	I	I	D	P	L	T	H	L	V	R	N	S	L	D	H	G	I	E	L	P	E	K	R	L	A	A	G	K	N	S	V	G	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	M	V	P	I	S	F	V	F	N	R	F	P	R	M	V	R	D	L	A	K	K	M	N	K	E	V	N	F	I	M	R	G	E	D	T	E	L	D	R	T	F	V	E	E	I	G	E	P	L	L	H	L	L	R	N	A	I	D	H	G	I	E	P	K	E	E	R	I	A	K	G	K	P	P	I	G	T	L
Template Known Secondary structure							T					T	S											T	T	T										T	T					T	T					T														T	T	S									T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.				.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		I	L	S	A	E	H	Q	G	G	N	I	C	I	E	V	T	D	D	G	A	G	L	N	R	E	R	I	L	A	K	A	A	S	Q	G	L	T	V	S	E	N	.	.	.	M	S	D	D	E	V	A	M	L	I	F	A	P	G	F	S	T	A	E	Q	V	T	D	V	S	G	R	G	V	G	M	D	V	V	K	R
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		I	L	S	A	R	H	E	G	N	N	V	V	I	E	V	E	D	D	G	R	G	I	D	K	E	K	I	I	R	K	A	I	E	K	G	L	I	D	E	S	K	A	A	T	L	S	D	Q	E	I	L	N	F	L	F	V	P	G	F	S	T	K	E	K	V	S	E	V	S	G	R	G	V	G	M	D	V	V	K	N
Template Known Secondary structure									S	S										S	S														T	T		S		T	T	G	G	G	S									T	T	T	S	T	T	T	T				S					T	S	S
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	Q	K	M	G	G	H	V	E	I	Q	S	K	Q	G	T	G	T	T	I	R	I	L	L	P	L	T	L	A	I	L	D	G	M	S	V	R	V	A	D	E	V	F	I	L	P	L	N	A	V	M	E	S	L	Q	P	R	E	A	D	L	H	P	L	A	G	G	E	R	V	L	E	V	R	G	E	Y	L	P
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		V	V	E	S	L	N	G	S	I	S	I	E	S	E	K	D	K	G	T	K	V	T	I	R	L	P	L	T	L	A	I	I	Q	A	L	L	V	K	V	N	N	L	V	Y	A	I	P	I	A	N	I	D	T	I	L	S	I	S	K	E	D	I	Q	R	V	Q	D	R	.	D	V	I	V	I	R	G	E	V	I	P
Template Known Secondary structure						T	T									T	T	S										S	S											S	S	S							T	T	T								B	T	T	T					S	S		.					S	S	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580		.	.	.	.	.	.	.	.	.	590	.
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	E	L	W	K	V	F	N	V	A	G	A	K	T	E	A	T	Q	G	I	V	V	I	L	Q	S	G	G	R	R	Y	A	L	L	V	D	Q	L	I	G	Q	H	Q	V	V	V	K	N	L	E	S	N	Y	R	K	V	P	G	I	S	A	A	T	I	L	G	D	G	S	V	A	L	I	V	D	V	S	A	L
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		V	Y	R	L	W	E	V	L	Q	I	E	H	.	K	E	E	L	E	E	M	E	A	V	I	V	R	V	G	N	R	K	Y	G	I	V	V	D	D	L	L	G	Q	D	D	I	V	I	K	S	L	G	K	V	F	S	E	V	K	E	F	S	G	A	A	I	L	G	D	G	S	I	A	L	I	I	N	V	S	G	I
Template Known Secondary structure									T	T				.					S	B									T	T								S											B				S	T	T	T	T			S								T	T	S								T	T	T
Template Predicted Secondary structure														.
Template SS confidence
		592	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
		641
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		671

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions