Job Description P07363 Confidence 100.00% Date Thu Jan 5 11:00:16 GMT 2012 Rank 6 Aligned Residues 274 % Identity 13% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	D	I	T	A	V	L	C	F	V	I	E	A	D	Q	I	T	F	E	T	V	E	V	S	P	K	I	S	T	P	P	V	L	K	L	A	A	E	Q	A	P	T	G	R	V	E	R	E	K	T	T	R	S	N	E	S	T	S	I	R	V	A	V	E	K	V	D	Q	L	I	N	L	V	G	E	L	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	F	L	R	Q	E	L	P	V	R	L	A	N	I	M	K	E	I	N	L	L	P	D	R	V	L	S	T	P	S	V	Q	L	V	Q	S	W	Y	V	Q	S	L	L	D	I	M	E	F	L	D	K	D	P	E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T
Template Known Secondary structure																					T	T	S						T	S																			T	T	S	S			T	T	S	T	T	T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.							300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.																	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																		.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	S	M	L	A	Q	R	S	S	E	L	D	P	V	N	.	.	.	.	.	.	H	G	D	L	I	T	S	M	G	Q	L	Q	R	N	A	R	D	L	Q	E	S	V	M	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	M	P	M	E	Y	V	F	S	R	Y	P	R	L	V	R
Query Conservation																		.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K
Template Known Secondary structure																																																T	S	S	S		S	S		S		S		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		342	.	.	.	.	.								.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.
Query Sequence		D	L	A	G	K	L	.	.	.	.	.	.	.	G	K	Q	V	E	L	T	L	V	G	S	S	T	E	L	D	K	S	L	I	E	R	I	I	D	P	L	T	H	L	V	R	N	S	L	D	H	G	I	E	L	P	E	K	R	L	A	A	G	K	N	S	V	G	N	L	I	L	S	A	E	H	Q	G	G	N	I
Query Conservation								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	.	.	.	.	.	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L
Template Known Secondary structure									S												S	S	S	T	T	S																													T	T	T	.	.	.	.	.	T		S													S	S
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	E	V	T	D	D	G	A	G	L	N	R	E	R	I	L	A	K	A	A	S	Q	G	L	T	V	S	E	N	M	S	D	D	E	V	A	M	L	I	F	A	P	G	F	S	T	A	E	Q	V	T	D	V	S	G	R	G	V	G	M	D	V	V	K	R	N	I	Q	K	M	G	G	H	V	E	I	Q	S	K
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Sequence		S	I	K	M	S	D	R	G	G	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	P	L	A	.	.	.	.	.	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	Q	L	F	S	M
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	G		T	T	T	T					.	.	.	.	.		S	S													T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.																						.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		495	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	T	G	T	T	I	R	I	L	L	P	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	F	G	T	D	A	V	I	Y	L	K	A	L
Template Known Secondary structure		T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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