Job Description P07363 Confidence 97.61% Date Thu Jan 5 11:00:16 GMT 2012 Rank 66 Aligned Residues 88 % Identity 16% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	I	I	D	P	L	T	H	L	V	R	N	S	L	D	H	G	I	E	L	P	E	K	R	L	A	A	G	K	N	S	V	G	N	L	I	L	S	A	E	H	Q	G	G	N	I	C	I	E	V	T	D	D	G	A	G	L	N	R	E	R	I	L	A	K	A	A	S	Q	G	L	T	V	S	E	N	M	S	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	L	Y	K	I	F	D	E	I	L	V	N	A	A	D	N	K	Q	R	D	.	.	.	.	.	.	.	.	.	P	K	M	S	C	I	R	V	T	I	D	P	E	N	N	L	I	.	.	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K
Template Known Secondary structure																		G	G	G	T		.	.	.	.	.	.	.	.	.	T	T										T	T	T	T			.	.						S	S					S			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.														.	.
		448	.	450	.	.	.	.	.						.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		D	E	V	A	M	L	I	F	.	.	.	.	.	A	P	G	F	S	T	A	E	Q	V	T	D	V	S	G	R	G	V	G	M	D	V	V	K
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	Y	D	D	D	E	K	K	V	T	G	G	R	N	G	Y	G	A	K	L	C	N
Template Known Secondary structure											S	S	S			S				G	G	G					S			S	S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions