Job Description P07363 Confidence 99.51% Date Thu Jan 5 11:00:16 GMT 2012 Rank 36 Aligned Residues 114 % Identity 16% Template c1mx0D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:type ii dna topoisomerase vi subunit b; PDBTitle: structure of topoisomerase subunit Resolution 2.30 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		S	L	I	E	R	I	I	D	P	L	T	H	L	V	R	N	S	L	D	H	G	I	E	L	P	E	K	R	L	A	A	G	K	N	S	V	G	N	L	I	L	S	A	E	H	.	Q	G	G	N	I	C	I	E	V	T	D	D	G	A	G	L	N	R	E	R	I	L	A	K	A	A	S	Q	G	L	T	V	S	E
Query Conservation																																															.
Alig confidence																							.	.	.	.	.	.	.																		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	A	R	A	L	Y	Q	T	V	R	E	L	I	E	N	S	L	D	A	T	.	.	.	.	.	.	.	D	V	H	G	I	L	P	N	I	K	I	T	I	D	L	I	D	D	A	R	Q	I	Y	K	V	N	V	V	D	N	G	I	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																			T	T	.	.	.	.	.	.	.	G	G	G	T														T	T	T	T										S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.			.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.		.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure																										.	.																						.
Query SS confidence																										.	.																						.
Query Sequence		N	M	S	D	D	E	V	A	M	L	I	F	A	P	G	F	S	T	A	E	Q	V	T	D	.	.	V	S	G	R	G	V	G	M	D	V	V	K	R	N	I	Q	K	M	G	G	H	.	V	E	I	Q	S	K	Q	G	T	G	T	T	I	R	I	L	L	P
Query Conservation																										.	.																						.
Alig confidence		.	.	.	.																					.	.																						.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	P	Q	E	V	P	N	A	F	G	R	V	L	Y	S	S	K	Y	V	N	R	Q	T	R	G	X	Y	G	L	G	V	K	A	A	V	L	Y	S	Q	X	H	Q	D	K	P	I	E	I	E	T	S	P	V	N	S	K	R	I	Y	T	F	K	L
Template Known Secondary structure		.	.	.	.	G	G	G							S	S	S			S			S	S	S			S			S	S																									T	T		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions