Job Description P07363 Confidence 100.00% Date Thu Jan 5 11:00:16 GMT 2012 Rank 7 Aligned Residues 243 % Identity 15% Template c1gjvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s Resolution 2.7 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		T	P	P	V	L	K	L	A	A	E	Q	A	P	T	G	R	V	E	R	E	K	T	T	R	S	N	E	S	T	S	I	R	V	A	V	E	K	V	D	Q	L	I	N	L	V	G	E	L	V	I	T	Q	S	M	L	A	Q	R	S	S	E	L	D	.	.	P	V	N	H	G	D	L	I	T	S	M	G	Q	L	Q
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.
Template Conservation
Template Sequence		N	P	T	I	L	H	V	H	E	L	Y	I	R	A	F	Q	K	L	T	D	F	P	P	I	K	D	Q	A	D	E	A	Q	Y	C	Q	L	V	R	Q	L	L	D	D	H	K	D	V	V	T	L	L	A	E	G	L	R	E	S	R	K	H	I	E	D	E	K	L	V	R	Y	F	L	D	K	T	L	T	S	R	L
Template Known Secondary structure		S																			T	S					S																		T	T	T													T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.												.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		R	N	A	R	D	L	Q	E	S	V	M	S	I	R	.	.	.	.	.	.	.	.	.	.	.	M	M	P	M	E	Y	V	F	S	R	Y	P	R	L	V	R	D	L	A	G	K	L	.	G	K	Q	V	E	L	T	L	V	G	S	S	T	E	L	D	K	S	L	I	E	R	I	I	D	P	L	T	H	L	V	R
Query Conservation																.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		G	I	R	M	L	A	T	H	H	L	A	L	H	E	D	K	P	D	F	V	G	I	I	C	T	R	L	S	P	K	K	I	I	E	K	W	V	D	F	A	R	R	L	C	E	H	K	Y	G	N	A	P	R	V	R	I	N	G	H	V	A	A	R	F	P	F	I	P	M	P	L	D	Y	I	L	P	E	L	L	K
Template Known Secondary structure													T	T	S			T	T			T	T																											S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	L	D	H	G	I	E	L	P	E	K	R	L	A	A	G	K	N	S	V	G	N	L	I	L	S	A	E	H	Q	G	G	N	I	C	I	E	V	T	D	D	G	A	G	L	N	R	E	R	I	L	A	K	A	A	S	Q	G	L	T	V	S	E	N	M	S	D	D	E	V	A	M	L	I	F	A	P	G	F
Query Conservation
Alig confidence								.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	M	R	A	T	.	.	.	.	M	E	S	H	L	D	T	P	Y	N	V	P	D	V	V	I	T	I	A	N	N	D	V	D	L	I	I	R	I	S	D	R	G	G	G	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	D	L	D	R	V	M	D	Y	H	F
Template Known Secondary structure								.	.	.	.			T		T	T		T	T	S												S	S										S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T	T	T	T	S	T	T
Template Predicted Secondary structure								.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.																						.	.	.	.	.	.	.	.	300	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	A	E	Q	V	T	D	V	S	G	R	G	V	G	M	D	V	V	K	R	N	I	Q	K	M	G	G	H	V	E	I	Q	S	K	Q	G	T	G	T	T	I	R	I	L	L	P	L	T
Query Conservation
Alig confidence					.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		T	T	A	.	.	.	.	.	.	.	G	F	G	F	G	L	P	T	S	R	A	Y	A	E	Y	L	G	G	S	L	Q	L	Q	S	L	Q	G	I	G	T	D	V	Y	L	R	L	R	H	I
Template Known Secondary structure					.	.	.	.	.	.	.			S														T									T	T	T											S
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		304	.	.								.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions