Job Description P07363 Confidence 97.82% Date Thu Jan 5 11:00:16 GMT 2012 Rank 62 Aligned Residues 106 % Identity 27% Template c1ea6A_ PDB info PDB header:dna repair Chain: A: PDB Molecule:pms1 protein homolog 2; PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp Resolution 2.7 Å

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		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	E	R	I	I	D	P	L	T	H	L	V	R	N	S	L	D	H	G	I	E	L	P	E	K	R	L	A	A	G	K	N	S	V	G	N	L	I	L	S	A	E	H	Q	G	G	N	I	C	I	E	V	T	D	D	G	A	G	L	N	R	E	R	I	L	A	K	A	A	S	Q	G	L	T	V	S	E	N	M
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	L	S	L	S	T	A	V	K	E	L	V	E	N	S	L	D	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	N	I	D	L	K	L	K	D	Y	G	V	D	.	L	I	E	V	S	D	N	G	C	G	V	E	E	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								T	T	T	T	S	.								S					T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50															.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.		.	.	.	.	.	500	.	.	.	.	.									.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																																																			.												.	.	.	.	.	.	.	.
Query SS confidence																																																			.												.	.	.	.	.	.	.	.
Query Sequence		S	D	D	E	V	A	M	L	I	F	A	P	G	F	S	T	A	E	Q	V	T	D	V	S	G	R	G	V	G	M	D	V	V	K	R	N	I	Q	K	M	G	G	H	V	E	I	Q	S	K	.	Q	G	T	G	T	T	I	R	I	L	L	.	.	.	.	.	.	.	.	P	L	T	L	A	I	L	D	G	M	S
Query Conservation																																																			.												.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.														.	.	.	.	.									.												.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.														.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	.	.	.	.	.	.	.	.	G	L	T	L	E	A	L	S	S	L	C	A	L	.	.	.	.	.	S	D	V	T	I	S	T	C	H	A	S	A	K	V	G	T	R	L	M	F	D	H	N	G	K	I	I	Q	K	T	P	Y	P	R	P	R	G	T	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	.	.	.	.	.	.	.	.	T	T	T											.	.	.	.	.	S									T	T		S	S								T	T	S												S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.														.	.	.	.	.
Template SS confidence
															80	.									.	.	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		517	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	V	A	D	E	V	F	I	L	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	V	Q	Q	L	F	S	T	L	P	V
Template Known Secondary structure						S	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions