 |
Job Description | P0A705 | Confidence | 94.95% | Date | Thu Jan 5 11:04:22 GMT 2012 |
Rank | 330 | Aligned Residues | 94 |
% Identity | 27% | Template | d1j8yf2 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Nitrogenase iron protein-like
|
Resolution | 2.00 |
|
 |
  |   |
436 | . | . | . | 440 | . | . | . | . | . | . | . | |
|
|
. | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | N | G | M | I | T | F | L | D | T | P | G | . |
. |
. |
H | A | A | F | T | S | M | R | A | R | G | A | Q | A | . |
. |
. |
. |
. |
T | D | I | V | V | L | V | V | A | A | D | D | G | V | M | P | Q | T | I | E | A | I | Q | H | A | K | A | A | Q | V | P | V | V | V | A | V | N | K | I | D | K | P | E | A | D | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|
| . | . | . |
|   |   |
|   |   |   |   |   |   |
|   |   |   | . | . | . | . | . |   |
|   |   |   |
|
|
|   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
| . |
|
|   |   |   |
Template Sequence |   |
E | K | M | E | I | I | I | V | D | T | A | G | R | H | G | Y | G | E | E | A | A | L | L | E | E | M | K | N | I | Y | E | A | I | K | P | D | E | V | T | L | V | I | D | A | S | I | G | . |
. |
Q | K | A | Y | D | L | A | S | K | F | N | Q | A | S | K | I | G | T | I | I | I | T | K | M | D | . |
G | T | A | K | G |
Template Known Secondary structure |   |
T | T |
| S |  |  |  |  |  |
|
|
| S |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  | G | G | G | G | . | . | G | G |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |
| T | T | . | S |
| S |
|  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
|
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
. | . | . | . | . |
  |
  |   |
508 | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | |
. | . | . | 540 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | V | K | N | E | L | S | Q | Y | G | I | L | P | E | E | W | G | G | E | S | Q | F | V | H | V | S | A | K | . |
A | G | T | G | I | D | E | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   | . |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|
|   |
|
|   |
|   |
|
|
Template Sequence |   |
G | G | A | L | S | A | V | A | A | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | T | I | K | F | I | G | T | G | E | K | I | D | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
| S | S | S | T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
256 | . | . | . | 260 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|