Job Description P0A705 Confidence 100.00% Date Thu Jan 5 11:04:22 GMT 2012 Rank 18 Aligned Residues 252 % Identity 27% Template c3tr5C_ PDB info PDB header:translation Chain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii Resolution 2.11 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.															.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	I	I	S	H	P	D	A	G	K	T	T	L	T	E	K	L	L	L	F	G	G	A	I	Q	L	A	G	T	I	K	S	R	H	A	T	S	D	W	X	E	L	E	K	Q	V	T	T	S	V	X	Q	F	P	Y	K	D	Y	L	I	N	L	L	D	T	P	G	H	A	D	F	T	E	D	T	Y	R	T	L
Template Known Secondary structure								T	T	S	S													T									T												T	T				S	S							T	T											S	T	T									G
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	T	D	I	V	V	L	V	V	A	A	D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	V	D	S	A	L	X	V	I	D	A	A	K	G	V	E	P	R	T	I	K	L	X	E	V	C	R	L	R	H	T	P	I	X	T	F	I	N	K	X	D	R	D	T	R	P	S	I	E	L	L	D	E	I	E	S	I	L	R	I	H	C	A	P	V	T	W	P	I	G	X	G	K	Y	F	K	G	I	Y
Template Known Secondary structure		G	G		S								T	T	T	B	S													T	T	T										T	T	S																S							S					S		T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
																		517	.	.	520	.	.	.	.																																	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	I	L	P	E	E	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L	L	D	A	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	I	E	D	A	I	Y	L	Y	Q	P	S	E	R	I	E	G	I	N	N	P	E	L	D	K	K	L	G	D	L	A	S	E	L	R	N	E	I	E	L	V	K	G	A	S	H	P	F	E	R	E	G	Y	L	K	G	E	L	T	P	I	F	F	G	S	A	I	N	N	F	G	V	G	E	L	L	D	A	F
Template Known Secondary structure			T	T	T	T														T	T									T																	S											T	S								B	G	G	G	T	B	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		549	550	.	.	.	.	.	.								.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.				.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.			600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.																				.	.	.																									.	.
Query SS confidence										.	.	.	.	.	.	.																				.	.	.																									.	.
Query Sequence		L	L	Q	A	E	V	L	E	.	.	.	.	.	.	.	L	K	A	V	R	K	G	M	A	S	G	A	V	I	E	S	F	L	D	.	.	.	K	G	R	G	P	V	A	T	V	L	V	R	E	G	T	L	H	K	G	D	I	V	L	C	.	.	G	F	E	Y	G	R	V	R	A	M	R	N	E	L	G	Q	E
Query Conservation										.	.	.	.	.	.	.																				.	.	.																									.	.
Alig confidence										.	.	.	.	.	.	.																				.	.	.																									.	.
Template Conservation
Template Sequence		V	K	E	A	P	P	P	Q	G	R	E	T	N	S	R	L	V	K	P	E	E	E	K	F	S	G	F	V	F	K	I	Q	A	N	X	D	P	G	H	R	D	R	I	A	F	L	R	I	A	S	G	Q	Y	Q	K	G	X	K	A	Y	H	V	R	L	K	K	E	I	Q	I	N	N	A	L	T	F	X	A	G	K
Template Known Secondary structure					S								B	S	S					T	T		S	S													S	T	T													S				T	T						G	G	G	T						S	S		B			B	T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
					617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	V	L	E	A	G	P	S	I	P	V	E	I	L	G	L	S	G	V	P	A	A	G	D	E	V	T	V	V	R	D
Query Conservation		.	.	.
Alig confidence		.	.	.																			.
Template Conservation																							.
Template Sequence		R	E	N	A	E	E	A	W	P	G	D	I	I	G	L	H	N	H	G	T	I	.	Q	I	G	D	T	F	T	Q	G	E	R
Template Known Secondary structure		S	S			S				T	T								S	S			.		T	T					S	S
Template Predicted Secondary structure																							.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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