 |
Job Description | P0A705 | Confidence | 90.82% | Date | Thu Jan 5 11:04:22 GMT 2012 |
Rank | 347 | Aligned Residues | 102 |
% Identity | 13% | Template | c3tauB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:guanylate kinase; |
PDBTitle: crystal structure of a putative guanylate monophosphaste kinase from2 listeria monocytogenes egd-e
|
Resolution | 2.05 Å |
|
 |
  |   |
390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | P | V | V | T | I | M | G | H | V | D | H | G | K | T | S | L | L | D | Y | I | R | S | T | K | V | A | S | G | E | A | G | G | I | T | Q | H | I | G | A | Y | H | V | E | T | E | N | G | M | I | T | F | L | D | T | P | G | H | A | A | F | T | S | M | R | A | R | G | A | Q | A | T | D | I | V | V | L | V | V |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
Template Sequence |   |
R | G | L | L | I | V | L | S | G | P | S | G | V | G | K | G | T | V | R | E | A | V | F | K | D | P | E | T | S | F | D | Y | S | I | S | X | T | T | R | L | P | R | E | G | E | Q | D | G | V | D | Y | Y | F | R | S | R | . |
. |
. |
E | V | F | E | Q | A | I | K | D | G | . |
. |
. |
. |
. |
K | X | L | E | Y | A |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|
|  |  |
|
|
|  |  | S | S |
|
|
| T | T |
|
| B | T | T | T | B |  |  |
|
|  | . | . | . |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|  | . | . | . |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
60 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
70 | . | . | . | . | . |
  |
  |   |
470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | D | D | G | V | M | P | Q | T | I | E | A | I | Q | H | A | K | A | A | Q | V | P | V | V | V | A | V | N | K |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
E | Y | V | G | N | Y | Y | G | T | P | L | E | Y | V | E | E | K | L | A | A | G | V | D | I | F | L | E | I | E | V |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
|  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|