Job Description P0A705 Confidence 97.78% Date Thu Jan 5 11:04:22 GMT 2012 Rank 273 Aligned Residues 110 % Identity 20% Template c3snhA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of nucleotide-free human dynamin1 Resolution 3.70 Å

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		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		P	Q	I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	V	G	R	D	F	L	P	R	G	S	G	.	.	T	R	R	P	L	V	L	Q	L	V	N	A	T	T	E	Y	A	E	F	L	H	C	K	G	K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	K	G
Template Known Secondary structure										T	T												T	S			S		S	S			.	.			S										S	S						T	T	T		S			B																	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
																	438	.	440	.	.	.	.	.	.	.	.							.	450	.	.	.	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.				490	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																.																											.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																.																											.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	I	T	F	L	D	T	P	G	H	.	.	.	.	.	.	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	.	I	V	V	L	V	V	A	A	D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	.	.	.	Q	V	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																.																											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																.																.	.										.	.	.
Template Conservation																																																																	.	.
Template Sequence		I	S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	M	T	K	P	D	I	E	F	Q	I	R	D	M	L	M	Q	F	V	T	K	E	N	C	L	I	L	A	V	S	P	A	N	S	D	L	A	N	S	.	.	D	A	L	K	V	A	K	E	V	D	P	Q	G	Q	R
Template Known Secondary structure				S										S	S	S		S																												S	T	T									T	T	S		S	T	T		.	.											S	S	S	S	S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	A	V	N	K	I	D	K	P	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	G	V	I	T	K	L	D	L	M	D	E
Template Known Secondary structure									S	T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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