Job Description P0A705 Confidence 99.19% Date Thu Jan 5 11:04:22 GMT 2012 Rank 97 Aligned Residues 150 % Identity 19% Template c3r7wC_ PDB info PDB header:protein transport Chain: C: PDB Molecule:gtp-binding protein gtr1; PDBTitle: crystal structure of gtr1p-gtr2p complex Resolution 2.77 Å

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		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.	450	.						.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																																				.																	.														.	.	.	.	.
Query SS confidence																																				.																	.														.	.	.	.	.
Query Sequence		P	R	A	P	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	.	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	.	M	I	T	F	L	D	T	P	G	H	A	A	F	.	.	.	.	.	T	S	M	R	A	R	G	A	Q	A
Query Conservation																																				.																	.														.	.	.	.	.
Alig confidence																																				.																	.														.	.	.	.	.
Template Conservation
Template Sequence		P	L	G	S	K	L	L	L	X	G	R	S	G	S	G	K	S	S	X	R	S	I	I	F	S	N	Y	S	A	F	D	T	R	R	L	G	A	T	I	D	V	E	H	S	H	L	R	F	L	G	N	X	T	L	N	L	W	D	C	G	G	Q	D	V	F	X	E	N	Y	F	T	K	Q	K	D	H	I	F	Q	X
Template Known Secondary structure													T	T	S											S				T	T	G	G	G	G						S									T	T	T											S									T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.							490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.			520	.	.	.	.	.	.	.	.	.		530	.	.
Predicted Secondary structure																														.	.	.	.	.	.																															.	.											.
Query SS confidence																														.	.	.	.	.	.																															.	.											.
Query Sequence		T	D	I	V	V	L	V	V	A	A	D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	.	.	.	.	.	.	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	.	.	L	P	E	E	W	G	G	E	S	Q	.	F	V	H
Query Conservation																														.	.	.	.	.	.																															.	.											.
Alig confidence																														.	.	.	.	.	.																															.	.											.
Template Conservation
Template Sequence		V	Q	V	L	I	H	V	F	D	V	E	S	T	E	V	L	K	D	I	E	I	F	A	K	A	L	K	Q	L	R	K	Y	S	P	D	A	K	I	F	V	L	L	H	K	X	D	L	V	Q	L	D	K	R	E	E	L	F	Q	I	X	X	K	N	L	S	E	T	S	S	E	F	G	F	P	N	L	I	G	F	P
Template Known Secondary structure											T	T		T	T																				T	T										T	T	S	S																						T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		533	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	K	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	I	W	D	E
Template Known Secondary structure				T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions