Job Description P0A705 Confidence 100.00% Date Thu Jan 5 11:04:22 GMT 2012 Rank 9 Aligned Residues 227 % Identity 30% Template c3mmpC_ PDB info PDB header:transferase Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins Resolution 2.50 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D	D
Query Conservation
Alig confidence																							.	.	.													.	.	.
Template Conservation																							.	.	.													.	.	.
Template Sequence		V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	.	.	.	L	A	K	T	Y	G	G	T	S	H	V	E	.	.	.	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D
Template Known Secondary structure								T	T	S													.	.	.													.	.	.				S	S																					T	S				S								T	T	T
Template Predicted Secondary structure																							.	.	.													.	.	.
Template SS confidence
		1014	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.				.	.	.	.	.	1040	.	.	.	.	.	.				.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.		.	.	.	.	.	.	.	500	.	.	.	.	.	.			.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.									.	540	.	.
Predicted Secondary structure																					.															.	.																																	.	.	.	.	.	.	.	.
Query SS confidence																					.															.	.																																	.	.	.	.	.	.	.	.
Query Sequence		G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	.	V	V	V	A	V	N	K	I	D	K	P	E	A	D	.	.	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	.	.	.	.	.	.	.	.	T	G	I	D
Query Conservation																					.															.	.																																	.	.	.	.	.	.	.	.
Alig confidence																					.															.	.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L
Template Known Secondary structure					T	T											T	T		S									G	G	G																					T	T	S		G	G	G														T
Template Predicted Secondary structure
Template SS confidence
		1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.					.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		E	L	L	D	A	I	L	L	Q	A	E	V	L	E	L	K	A	V	R	K	G	M	A	S	G	A	V	I	E	S	F	L	D	K	G	R	G	P	V	A	T	V	L	V	R	E	G	T	L	H	K	G	D	I	V	L	C	G	F	E	Y	.	.	.	.	G	R	V	R	A	M	R	N	E	L	G	Q	E	V	L
Query Conservation																																																															.	.	.	.
Alig confidence										.	.																																																				.	.	.	.										.
Template Conservation										.	.																																																																	.
Template Sequence		E	L	A	G	F	L	D	S	.	.	Y	I	P	E	P	E	R	A	I	D	K	P	F	L	L	P	I	E	D	V	F	S	I	S	G	R	G	T	V	V	T	G	R	V	E	R	G	I	I	K	V	G	E	E	V	E	I	V	G	I	K	E	T	Q	K	S	T	C	T	G	V	E	M	F	.	R	K	L	L	D
Template Known Secondary structure										.	.		S						G	G	G	S													T	T	T										B	S				T	T							S	S	S													S	.	S				S
Template Predicted Secondary structure										.	.																																																																	.
Template SS confidence
		1190	.	.	.	.	.	.	.			.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.		.	.	.	.	.
		619	620	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G	P	S	I	P	V	E	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	R	A	G	E	N	V	G	V	L
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		1267	.	.	1270	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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