Job Description P0A705 Confidence 99.46% Date Thu Jan 5 11:04:22 GMT 2012 Rank 70 Aligned Residues 198 % Identity 20% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	I	K	A	M	M	K	L	G	A	M	A	T	I	N	Q	V	I	D	Q	E	T	A	Q	L	V	A	E	E	M	G	H	K	V	I	L	R	R	E	N	E	L	E	E	A	V	M	S	D	R	D	T	G	A	A	A	E	P	R	A	P	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y
Query Conservation
Alig confidence																				.																.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																				.																.	.	.	.	.	.													.	.	.	.	.	.	.
Template Sequence		D	C	L	K	L	L	L	K	G	R	A	L	V	G	T	V	N	E	.	A	G	E	T	A	L	D	I	A	R	K	K	H	H	K	.	.	.	.	.	.	E	C	E	E	L	L	E	Q	A	Q	A	N	.	.	.	.	.	.	.	K	E	M	R	I	L	M	L	G	L	D	A	A	G	K	T	T	I	L	Y	K
Template Known Secondary structure										T					S				T	.	T											T	T		T	.	.	.	.	.	.	T								T				.	.	.	.	.	.	.										S	T	T	S	S
Template Predicted Secondary structure																				.																.	.	.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.		.	.	.	.	.	.	660	.	.	.	.	.	.	.	.							.	670	.	.	.	.	.	.	.	.	.	680								.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.						480	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D	D	G	V	M	P	Q	T	.	.	.	.	.	I	E	A	I	Q	H
Query Conservation																																																																							.	.	.	.	.
Alig confidence													.	.	.																																																								.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		L	K	L	G	Q	S	V	T	T	I	P	.	.	.	T	V	G	F	N	V	E	T	V	T	Y	K	N	V	K	F	N	V	W	D	V	G	G	Q	D	K	I	R	P	L	W	R	H	Y	Y	T	G	T	Q	G	L	I	F	V	V	D	C	A	D	R	D	R	I	D	E	A	R	Q	E	L	H	R	I	I	N	D
Template Known Secondary structure					S	S							.	.	.		S	S									S	S												G	G	G	S	T	T	G	G	G	G	T	T	T										S	S			T	T													T	S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.		.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	.	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L	L	D	A	I	L
Query Conservation																						.
Alig confidence																						.																				.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		R	E	M	R	D	A	I	I	L	I	F	A	N	K	Q	D	L	P	D	A	M	K	P	H	E	I	Q	E	K	L	G	L	T	R	I	R	D	R	N	W	.	.	.	.	Y	V	Q	P	S	C	A	T	S	G	D	G	L	Y	E	G	L	T	W	L	T
Template Known Secondary structure		T	T		T	T										T	T	S	S	S											T	T		T	T			S	S			.	.	.	.						B	T	T	T	T	B	T
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions