Job Description P0A705 Confidence 98.93% Date Thu Jan 5 11:04:22 GMT 2012 Rank 144 Aligned Residues 145 % Identity 18% Template c3dpuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rab family protein; PDBTitle: roccor domain tandem of rab family protein (roco) Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		K	V	H	L	I	G	D	G	M	A	G	K	T	S	L	L	K	Q	L	I	G	G	L	N	V	V	T	K	Q	A	P	N	I	K	G	L	.	E	N	D	D	E	L	K	E	C	L	F	H	F	W	D	F	G	G	Q	E	I	M	H	A	S	H	Q	F	F	M	T	R	S	S	V	Y	M	L	L	L	D	S	R
Template Known Secondary structure							S	S	S		S	S																			G	G	G	S	G	G	G	.	T	T		S	T	T	T	T										S			T	T	T	T	T							S	S									G	G
Template Predicted Secondary structure																																						.
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.				.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	.	.	.	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L	L	D	A	I
Query Conservation																																.	.	.
Alig confidence																																.	.	.																.	.	.	.	.	.	.	.	.													.
Template Conservation																																																		.	.	.	.	.	.	.	.	.													.
Template Sequence		T	D	S	N	K	H	Y	W	L	R	H	I	E	K	Y	G	G	K	S	P	V	I	V	V	M	N	K	I	D	E	N	P	S	Y	N	I	E	Q	K	K	I	N	E	R	F	P	A	I	.	.	.	.	.	.	.	.	.	E	N	R	F	H	R	I	S	C	V	E	S	.	I	A	K	S	L	K	S	A	V
Template Known Secondary structure		G	G	G	G												S	S	S										T	T	T		T	T													G	G	G	.	.	.	.	.	.	.	.	.	T	T									T	T	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.													.
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.										.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions