Job Description P0A705 Confidence 98.76% Date Thu Jan 5 11:04:22 GMT 2012 Rank 176 Aligned Residues 151 % Identity 16% Template c3cbqA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:gtp-binding protein rem 2; PDBTitle: crystal structure of the human rem2 gtpase with bound gdp Resolution 1.82 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																											.																														.	.
Query SS confidence																											.																														.	.
Query Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	.	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	.	.	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A
Query Conservation																											.																														.	.
Alig confidence																											.																														.	.
Template Conservation
Template Sequence		V	M	L	V	G	E	S	G	V	G	K	S	T	L	A	G	T	F	G	G	L	Q	G	D	S	A	H	E	P	E	N	P	E	D	T	Y	E	R	R	I	M	V	D	K	E	E	V	T	L	V	V	Y	D	I	W	E	Q	G	D	A	G	G	W	L	R	D	H	C	L	Q	T	G	D	A	F	L	I	V	F	S
Template Known Secondary structure							S	T	T	S	S								T							G	G	G	T	T	T	S		T	T									T	T														S	G	G	G												S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		471	.	.						.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.				.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure					.	.	.	.	.																																		.	.	.
Query SS confidence					.	.	.	.	.																																		.	.	.
Query Sequence		A	D	D	.	.	.	.	.	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	.	.	.	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D
Query Conservation					.	.	.	.	.																																		.	.	.
Alig confidence					.	.	.	.	.																																		.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		V	T	D	R	R	S	F	S	K	V	P	E	T	L	L	R	L	R	A	G	R	P	H	H	D	L	P	V	I	L	V	G	N	K	S	D	L	A	R	S	R	E	V	S	L	E	E	G	R	H	L	A	G	T	L	S	.	.	.	.	.	.	.	.	.	C	K	H	I	E	T	S	A	A	L	H	H	N	T	R
Template Known Secondary structure		T	T							T												S	T	T	S											T	T		T	T	T			S												T	T	.	.	.	.	.	.	.	.	.							B	T	T	T	T	B	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.										.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		543	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	D	A	I	L	L	Q	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	F	E	G	A	V	R	Q	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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