Job Description P0A705 Confidence 99.01% Date Thu Jan 5 11:04:22 GMT 2012 Rank 124 Aligned Residues 142 % Identity 15% Template c2zejA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine-rich repeat kinase 2; PDBTitle: structure of the roc domain from the parkinson's disease-associated2 leucine-rich repeat kinase 2 reveals a dimeric gtpase Resolution 2.00 Å

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		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	L	X	I	V	G	N	T	G	S	G	K	T	T	L	L	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	X	K	T	V	G	I	D	V	K	D	W	P	I	L	V	L	N	V	W	D	F	A	G	R	E	E	F	Y	S	T	H	P	H	F	X	T	Q	R	A	L	Y	L	A	V	Y	D	L
Template Known Secondary structure								S		T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	T				S																		S						T	T	S							S									G
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1335	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.														.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.
		472	.	.	.	.	.					.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.		.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																																																							.
Query SS confidence								.	.	.	.																																																							.
Query Sequence		D	D	G	V	M	P	.	.	.	.	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	.	H	V	S	A	K	A	G	T	G	I	D	E	L	L	D
Query Conservation								.	.	.	.																																																							.
Alig confidence								.	.	.	.																																															.	.	.						.
Template Conservation																																																										.	.	.
Template Sequence		S	K	G	Q	A	E	V	D	A	X	K	P	W	L	F	N	I	K	A	R	A	S	S	S	P	V	I	L	V	G	T	H	L	D	V	S	D	E	K	Q	R	K	A	C	X	S	K	I	T	K	E	L	L	N	K	R	.	.	.	G	F	P	A	I	R	D	Y	H	F	V	N	A	T	E	E	S	D	A	L	A
Template Known Secondary structure		G	G							T													T	T										G	G	G																	T	T	T		T	.	.	.	T	S											T	T	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		1422	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.				.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.
		547	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1499	1500	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions