Job Description P0A705 Confidence 99.10% Date Thu Jan 5 11:04:22 GMT 2012 Rank 109 Aligned Residues 159 % Identity 14% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	.	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		L	V	L	V	G	D	V	Q	C	G	K	T	A	M	L	Q	V	L	A	K	D	C	Y	P	E	T	Y	V	P	T	V	F	E	N	Y	T	A	C	L	E	T	E	E	Q	R	V	E	L	S	L	W	D	T	S	G	S	P	Y	Y	D	N	V	R	P	L	C	Y	S	D	S	D	A	V	L	L	C	F	D	I	S
Template Known Secondary structure							S	T	T	S	S											S					S					S											S	S													S	G	G	G	T	T	T	G	G	G	G	G	T	T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.			.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.								.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.
Predicted Secondary structure																		.	.																																				.	.	.	.	.	.	.																	.
Query SS confidence																		.	.																																				.	.	.	.	.	.	.																	.
Query Sequence		D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	.	.	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	.	.	.	.	.	.	.	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	.	G	I	D
Query Conservation																		.	.																																				.	.	.	.	.	.	.																	.
Alig confidence																		.	.																																				.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L	R	T	D	L	S	T	L	M	E	L	S	H	Q	K	Q	A	P	I	S	Y	E	Q	G	C	A	I	A	K	Q	L	G	A	E	I	Y	L	E	G	S	A	F	T	S	E	K	S	I	H
Template Known Secondary structure			T	T	T															T	T	S									G	G	G	G	G											T	T																T	T		S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		543	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	D	A	I	L	L	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	F	R	T	A	S	M	L	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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