 |
Job Description | P0A705 | Confidence | 99.27% | Date | Thu Jan 5 11:04:22 GMT 2012 |
Rank | 87 | Aligned Residues | 123 |
% Identity | 27% | Template | c2qptA_ |
PDB info |
PDB header:endocytosis | Chain: A: PDB Molecule:eh domain-containing protein-2; |
PDBTitle: crystal structure of an ehd atpase involved in membrane remodelling
|
Resolution | 3.10 Å |
|
 |
  |   |
392 | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
440 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | V | T | I | M | G | H | V | D | H | G | K | T | S | L | L | D | Y | I | R | S | T | K | V | A | S | G | E | A | G | G | I | T | Q | H | I | G | A | Y | H | V | E | T | E | N | G | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | T | F | L | D | T | P | G |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
Template Sequence |   |
P | M | V | L | V | A | G | Q | Y | S | T | G | K | T | S | F | I | Q | Y | L | L | E | Q | E | V | P | G | S | R | V | G | P | E | P | T | T | D | C | F | V | A | V | M | H | G | E | T | E | G | T | V | P | G | N | T | F | L | N | R | F | M | C | A | Q | L | P | N | Q | V | L | E | S | I | S | I | I | D | T | P | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  | B | T | T | S |
|  |  |  |  |  |  |  |  |  | T | S |
|
| S | S |
|
|
|
| S | S |
|
|
|
| S |  |  |  |  |  |
|
| S | S | S |  |  |  |
|
|
|
|
|
| T | T |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
448 | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | |
. | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | |
. | . | . | . | 510 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
H | A | A | F | T | S | M | R | A | R | G | A | Q | A | T | D | I | V | V | L | V | V | A | A | D | D | . |
G | V | M | P | Q | T | I | E | A | I | Q | H | A | K | A | A | Q | V | P | V | V | V | A | V | N | K | I | D | K | P | E | A | . |
D | P | D | R | V | K | N | E | L |
Query Conservation |   |
. | . | . | . |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |   |   | . |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|   |
|   |   |   |
|
|   |   |   |   |
|   |
|
Template Sequence |   |
I | L | S | R | G | Y | D | F | P | A | V | L | R | W | F | A | E | R | V | D | L | I | I | L | L | F | D | A | H | K | L | E | I | S | D | E | F | S | E | A | I | G | A | L | R | G | H | E | D | K | I | R | V | V | L | N | K | A | D | M | V | E | T | Q | Q | L | M | R | V | Y | G | A | L |
Template Known Secondary structure |   |
B |
|
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  | T | T | S |
|
|
|
|  |  |  |  |  |  |  |  |  | T | T | T |
| G | G | G |  |  |  |  |  |  |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|