Job Description P0A705 Confidence 95.99% Date Thu Jan 5 11:04:22 GMT 2012 Rank 325 Aligned Residues 199 % Identity 16% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		S	Q	V	I	K	A	M	M	K	L	G	A	M	A	T	I	N	Q	V	I	D	Q	E	T	A	Q	L	V	A	E	E	M	G	H	K	V	I	L	R	R	E	N	E	L	E	E	A	V	M	S	D	R	D	T	G	A	A	A	E	P	R	A	P	.	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L
Query Conservation																																																																	.
Alig confidence																																																																	.
Template Conservation
Template Sequence		R	K	A	E	K	L	L	Q	E	T	G	I	K	E	S	T	K	T	N	T	L	K	K	L	L	R	F	S	V	E	A	G	G	L	T	E	E	N	V	V	G	K	L	Q	E	I	L	C	D	M	L	P	S	A	D	K	W	Q	E	P	I	H	S	K	Y	I	V	L	F	G	S	T	G	A	G	K	T	T	T	L
Template Known Secondary structure											S	S														T					S	S	S				S	S	S												T	S			S	T	T	S				S		S	S	B							S	S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.																																.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	L	A	A	I	S	M	L	E	K	H	K	K	I	A	F	I	T	T	D	T	Y	R	I	A	A	V	E	Q	L	K	T	Y	A	E	L	L	Q	A	P	L	E	V	C	Y	T	K	E	E	F	Q	Q	A	K	E	L	F	S	E	Y	D	H	V	F	V	D	T	A	G	R	N	F	K	D	P	Q	Y	I	D
Template Known Secondary structure											T	S												S	S	T	T	T	T					T					T	T							S	S										T	T	T	T	S	S												S	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		458	.	460	.							.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		G	A	Q	A	.	.	.	.	.	.	T	D	I	V	V	L	V	V	A	A	D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.															.																				.						.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																				.						.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	K	E	T	I	P	F	E	S	S	I	Q	S	F	L	V	L	S	A	T	A	K	Y	.	E	D	M	K	H	I	V	K	R	F	S	S	V	P	V	N	Q	Y	I	.	F	T	K	I	D	.	E	T	T	S	L	G	S	V	F	N	I	L	A	E	S	K	.	.	.	.	.	.	.	.	.	.	.	.	I
Template Known Secondary structure							S				T	T	B								T	T	S			.				T	T	T	T	T	T	S	S	S	S							.				T	T	.	T		S											T		S	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																										.																				.						.																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.													.
		532	.	.	.	.	.		.	.	540	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		H	V	S	A	K	A	.	G	T	G	I	D	E
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		G	V	G	F	M	T	N	G	Q	N	V	P	E
Template Known Secondary structure										S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions