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Job DescriptionP0A705
Confidence98.58%DateThu Jan 5 11:04:22 GMT 2012
Rank222Aligned Residues178
% Identity15%Templatec2ohfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:gtp-binding protein 9; PDBTitle: crystal structure of human ola1 in complex with amppcp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   388.390.........400.........410.... .....420.........430.........440.........450.........460...
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Query Sequence  EPRAPVVTIMGHVDHGKTSLLDYIRST. . . . KVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATD
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Template Sequence  FGTSLKIGIVGLPNVGKSTFFNVLTNDPNESRVPVPDERFDFLCQYHKPASKIPAFLNVVDIAGGNAFLSH. . . . ISACD
Template Known Secondary structure  SSS




SSSS


S




S






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   1920.........30.........40.........50.........60.........70.........80......... 90....
 
   464.....470.... .....480.........490.
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Query Sequence  IVVLVVAADDG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VMPQTIEAIQHAKAAQV.
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Template Sequence  GIFHLTRAVDPIRDIEIIHEELQLKDEEMIGPIIDKLEKVAKPEYDIMCKVKSWVIDKPVRFYHDWNDKEIEVLNKHLFL
Template Known Secondary structure  S

TTTT
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TT


GGG






G
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   119120.........130.........140.........150.........160.........170.........180.........190........
 
   492.......500.........510.........520.........530..... ....540.......
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Query Sequence  . . . PVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSA. . . . . . . . . . . . . . . . . . . . . KAGTGIDELLDA
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Template Sequence  TSKPMVYLVNLSEKDYIRKKNKWLIKIKE. . WVDKYDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKA
Template Known Secondary structure  GGS


T

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   221........230.........240......... 250.........260.........270.........280.........290........
 
   548.550.........560.........570.
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Query Sequence  ILLQAEVLELKAVRKGMASGAVIE
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Template Sequence  GFAALQLEYFFTAGPDEVRAWTIR
Template Known Secondary structure  TTSSS
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   299300.........310.........320..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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