Return to main results Retrieve Phyre Job Id

Job DescriptionP0A705
Confidence99.06%DateThu Jan 5 11:04:22 GMT 2012
Rank117Aligned Residues154
% Identity24%Templatec2h18A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:adp-ribosylation factor-like protein 8a; PDBTitle: structure of human adp-ribosylation factor-like 10b (arl10b)
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   389390.........400.........410.........420.........430.........440.........450.........460........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  PRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLV
Query Conservation         
 







 
 
          
  



                 




  
      
    
   

Alig confidence 











































.......




























Template Conservation 

  

 


   






  
                     .......                             
Template Sequence  KEEMELTLVGLQYSGKTTFVNVIASGQFNEDMINMRKITKGNVT. . . . . . . IKLWDIGGQPRFRSMWERYCRGVSAIVYM
Template Known Secondary structure  TS
STTSSTTT




TT.......SS

TTT
S
Template Predicted Secondary structure 



















.......















Template SS confidence 















































































   18.20.........30.........40.........50.........60. ........70.........80.........90
 
   469470.........480....... ..490.........500.........510.........520.........530.........540...
Predicted Secondary structure 





.....



























Query SS confidence 


















. . . . .























































Query Sequence  VAADDGVMPQTIEAIQHAK. . . . . AAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDE
Query Conservation 
    
   

 
      .....      

  

 
                             
  

  
     
Alig confidence 


















.....



































...
















Template Conservation         
                      
    
 
                      ...       


 
 

 
Template Sequence  VDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDR. . . EICCYSISCKEKDNIDI
Template Known Secondary structure  TT
GGGT
GGGTT


TTSTT


TTGGG

SS...

BTTTTBS
Template Predicted Secondary structure 
























...







Template SS confidence 















































































   96...100.........110.........120.........130.........140.........150..... ....160.........170..
 
   544.....550..
Predicted Secondary structure 
Query SS confidence 








Query Sequence  LLDAILLQA
Query Conservation 
        
Alig confidence 








Template Conservation   
  

  
Template Sequence  TLQWLIQHS
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 








   173......180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions