Job Description P0A705 Confidence 99.48% Date Thu Jan 5 11:04:22 GMT 2012 Rank 68 Aligned Residues 109 % Identity 19% Template c2gedB_ PDB info PDB header:protein transport, signaling protein Chain: B: PDB Molecule:signal recognition particle receptor beta PDBTitle: signal recognition particle receptor beta-subunit in2 nucleotide-free dimerized form Resolution 2.20 Å

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		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450					.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		E	P	R	A	P	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	.	.	.	.	F	T	S	M	R	A	R	G	A	Q	A	T	D
Query Conservation																																																																	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	Y	Q	P	S	I	I	I	A	G	P	Q	N	S	G	K	T	S	L	L	T	L	L	T	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	G	S	G	V	T	L	V	D	F	P	G	H	V	K	L	R	Y	K	L	S	D	Y	L	K	T	R	A	K	F	V	K
Template Known Secondary structure														T	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T		S				T	T	T					S											G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		464	.	.	.	.	.	470	.	.	.	.										.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.
Query Sequence		I	V	V	L	V	V	A	A	D	D	G	.	.	.	.	.	.	.	.	.	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q
Query Conservation													.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	I	F	M	V	D	S	T	V	D	P	K	K	L	T	T	T	A	E	F	L	V	D	I	L	S	I	T	E	S	S	C	E	N	G	I	D	I	L	I	A	C	N	K	S	E	L	F	T	A	R	P	P	S	K	I	K	D	A	L	E
Template Known Secondary structure									S	S																								S	T	T											T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions