Job Description P0A705 Confidence 98.97% Date Thu Jan 5 11:04:22 GMT 2012 Rank 135 Aligned Residues 149 % Identity 17% Template c2g3yA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:gtp-binding protein gem; PDBTitle: crystal structure of the human small gtpase gem Resolution 2.40 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	.	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		V	V	L	I	G	E	Q	G	V	G	K	S	T	L	A	N	I	F	A	G	V	H	D	S	M	D	S	D	L	G	E	D	T	Y	E	R	T	L	M	V	D	G	E	S	A	T	I	I	L	L	D	M	W	E	N	K	G	E	N	E	W	L	H	D	H	C	M	Q	V	G	D	A	Y	L	I	V	Y	S	I	T
Template Known Secondary structure								T	T	S	S														T	T						T	T									T	T											T	T	T	T															S								T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.						.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.				.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																			.	.	.
Query SS confidence																		.	.	.	.	.																			.	.	.
Query Sequence		D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	.	.	.	.	.	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	.	.	.	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L
Query Conservation																		.	.	.	.	.																			.	.	.
Alig confidence																		.	.	.	.	.																			.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.
Template Sequence		D	R	A	S	F	E	K	A	S	E	L	R	I	Q	L	R	R	A	R	Q	T	E	D	I	P	I	I	L	V	G	N	K	S	D	L	V	R	C	R	E	V	S	V	S	E	G	R	A	C	A	V	V	F	.	.	.	.	.	.	.	.	.	D	C	K	F	I	E	T	S	A	A	V	Q	H	N	V	K	E	L
Template Known Secondary structure																		T	S	G	G	G	T	T	S									T	T		G	G	G			S													.	.	.	.	.	.	.	.	.	T							B	T	T	T	T	B	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		545	.	.	.	.	550	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	I	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	G	I	V	R	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions