Job Description P0A705 Confidence 98.34% Date Thu Jan 5 11:04:22 GMT 2012 Rank 258 Aligned Residues 149 % Identity 15% Template c2f9lA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rab11b, member ras oncogene family; PDBTitle: 3d structure of inactive human rab11b gtpase Resolution 1.55 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D	D
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		V	V	L	I	G	D	S	G	V	G	K	S	N	L	L	S	R	F	T	R	N	E	F	.	N	L	S	T	I	G	V	E	F	A	T	R	S	I	Q	V	D	G	K	T	I	K	A	Q	I	W	D	T	A	G	Q	E	R	Y	R	R	I	T	S	A	Y	Y	R	G	A	V	G	A	L	L	V	Y	D	I	A	K
Template Known Secondary structure						S	S	T	T	S	S											S			.						S											T	T											S	S	G	G	G	T	T								T	T		S								T	T
Template Predicted Secondary structure																									.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		474	.	.	.	.	.	480					.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		G	V	M	P	Q	T	I	.	.	.	.	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L	L	D	A	I	L
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																																						.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		H	L	T	Y	E	N	V	E	R	W	L	K	E	L	R	D	H	A	D	S	N	I	V	I	M	L	V	G	N	K	S	D	L	R	H	L	R	A	V	P	T	D	E	A	R	A	F	A	.	.	.	.	.	.	E	K	N	N	L	S	F	I	E	T	S	A	L	D	S	T	N	V	E	E	A	F	K	N	I	L
Template Known Secondary structure							T												S		T	T										T	T		G	G	G			S										.	.	.	.	.	.			T	T								T	T	T		T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions