Job Description P0A705 Confidence 99.97% Date Thu Jan 5 11:04:22 GMT 2012 Rank 22 Aligned Residues 234 % Identity 19% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D	D
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.																																																				.
Template Conservation																					.	.	.	.	.	.	.	.																																																				.
Template Sequence		V	A	I	I	G	T	E	K	S	G	R	T	S	L	A	A	N	L	G	.	.	.	.	.	.	.	.	K	K	G	T	S	S	D	I	T	X	Y	N	N	D	K	E	G	R	N	X	V	F	V	D	A	H	S	Y	P	K	T	L	K	S	L	I	T	A	L	N	I	S	D	I	A	V	L	C	I	P	P	.	Q
Template Known Secondary structure							S	T	T	S	S							T	T	S	.	.	.	.	.	.	.	.						S	S	S							S	S	S	S								T	T	T	T	T											T		S								T	.	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.																																																				.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.									.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.		.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.						.	540	.	.	.	.	.	.
Predicted Secondary structure																					.																.																																.	.	.	.	.
Query SS confidence																					.																.																																.	.	.	.	.
Query Sequence		G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	.	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	.	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	.	.	.	.	.	T	G	I	D	E	L	L	D
Query Conservation																					.																.																																.	.	.	.	.
Alig confidence																					.																.											.	.																				.	.	.	.	.
Template Conservation																																																.	.
Template Sequence		G	L	D	A	H	T	G	E	C	I	I	A	L	D	L	L	G	F	K	H	G	I	I	A	L	T	R	S	D	S	T	H	X	H	A	I	D	E	L	K	A	K	L	K	V	I	.	.	T	S	G	T	V	L	Q	D	W	E	C	I	S	L	N	T	N	K	S	A	K	N	P	F	E	G	V	D	E	L	K	A
Template Known Secondary structure																	T	T											G	G	G	S																.	.	T	T	T	S	T	T	T	T										T	T	S	S	S	T	T	T	T
Template Predicted Secondary structure																																																.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		547	.			.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.			600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure				.	.																																																				.	.
Query SS confidence				.	.																																																				.	.
Query Sequence		A	I	.	.	L	L	Q	A	E	V	L	E	L	K	A	V	R	K	G	M	A	S	G	A	V	I	E	S	F	L	D	K	G	R	G	P	V	A	T	V	L	V	R	E	G	T	L	H	K	G	D	I	V	L	C	.	.	G	F	E	Y	G	R	V	R	A	M	R	N	E	L	G	Q	E	V	L	E	A	G	P
Query Conservation				.	.																																																				.	.
Alig confidence				.	.																										.	.	.																								.	.															.
Template Conservation																															.	.	.																																								.
Template Sequence		R	I	N	E	V	A	E	K	I	E	A	E	N	A	E	L	N	S	L	P	A	R	I	F	I	D	H	A	F	.	.	.	N	V	T	C	V	V	L	G	V	V	K	Q	G	I	S	K	D	K	D	K	T	K	I	F	P	L	D	R	D	I	E	I	R	S	I	Q	S	H	D	.	V	D	I	D	S	A	P	A
Template Known Secondary structure																	G	G	G	S											.	.	.													S				T	T							T	T	T											T	T	.				S				T
Template Predicted Secondary structure																															.	.	.																																								.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.
		623	.	.	.	.	.	.			630	.	.	.	.	.	.	.		.	.	640	.	.
Predicted Secondary structure									.	.									.
Query SS confidence									.	.									.
Query Sequence		S	I	P	V	E	I	L	.	.	G	L	S	G	V	P	A	A	.	G	D	E	V	T
Query Conservation									.	.									.
Alig confidence									.	.									.
Template Conservation
Template Sequence		G	T	R	V	G	X	R	L	K	N	V	Q	A	K	D	I	E	R	G	F	I	I	S
Template Known Secondary structure		T									S			G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions