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Job DescriptionP0A705
Confidence99.23%DateThu Jan 5 11:04:22 GMT 2012
Rank94Aligned Residues138
% Identity25%Templatec2dykB_
PDB info PDB header:ribosomeChain: B: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of n-terminal gtp-binding domain of enga from2 thermus thermophilus hb8
Resolution1.96 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   392.......400.........410.........420.........430.........440....... ..450.........460....
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Query Sequence  PVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPG. . . . . . . HAAFTSMRARGAQATDI
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Template Sequence  HKVVIVGRPNVGKSSLFNRLLKKRS. . . . . . . . . . DLKEGVVETDRGRFLLVDTGGLWSGDKWEKKIQEKVDRALEDAEV
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   2.......10.........20...... ...30.........40.........50.........60.........70.
 
   465....470.........480.........490.........500.........510.........520.........530.........540....
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Query Sequence  VVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDEL
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Template Sequence  VLFAVDGRAELTQADYEVAEYLRRKGKPVILVATKVDDPK. . . . . . . . . . HELYLGPLYGLGFGDPIPTSSEHARGLEEL
Template Known Secondary structure  SSS


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SGG..........GGGG
GGGGGSSS
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   83......90.........100.........110.........120.. .......130.........140.........150..
 
   545....
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Query Sequence  LDAIL
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Template Sequence  LEAIW
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   153....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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