 |
Job Description | P0A705 | Confidence | 99.90% | Date | Thu Jan 5 11:04:22 GMT 2012 |
Rank | 34 | Aligned Residues | 103 |
% Identity | 28% | Template | c2crvA_ |
PDB info |
PDB header:translation | Chain: A: PDB Molecule:translation initiation factor if-2; |
PDBTitle: solution structure of c-terminal domain of mitochondrial2 translational initiationfactor 2
|
Resolution | UNK |
|
 |
  |   |
787 | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | |
|
|
. | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | E | L | K | Q | Q | I | I | G | L | A | E | V | R | D | V | F | K | S | P | . |
. |
. |
K | F | G | A | I | A | G | C | M | V | T | E | G | V | V | K | R | H | N | P | I | R | V | L | R | D | N | V | V | I | Y | E | G | E | L | E | S | L | R | R | F | K | D | D | V | N | E | V | R | N | G | M | E | C | G | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |
|
|
|
|   |
|   |   |
|   |
|   |
|   |   |   |
|
|
|
|
|   |
|   |
|
|   |   |
|   |
|   |
|
|
|
|   |
|
|
|
|   |
|
|   |   |
|   |
|
|
|
|
Template Sequence |   |
S | S | G | S | S | G | Y | P | I | G | E | A | S | I | L | A | T | F | T | V | T | E | G | K | K | K | I | P | V | A | D | C | R | V | Q | K | G | Q | L | E | R | H | K | K | F | K | L | I | R | N | G | Q | V | I | W | K | G | S | L | T | S | L | K | H | H | K | D | D | I | S | V | I | K | T | G | M | D | C | G | L |
Template Known Secondary structure |   |
|
| S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  | T | T | S |
|  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| S |  |  |  | S | S | S | S |
|
| S |  |  |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
864 | . | |
. | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  | . |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | . |
K | N | Y | N | D | V | R | T | G | D | V | I | E | V | F | E | I | I | E | I | Q | R | T | I |
Query Conservation |   |
  |   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
|   |
|   |
|
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|
Template Sequence |   |
S | L | D | E | E | K | V | E | F | K | P | G | D | Q | V | I | C | Y | E | E | N | K | V | P | T | K | T |
Template Known Secondary structure |   |
 |
| S |
| T | T | S |
|
|
| T | T |  |  |  |  |  |  |
|
| S |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|