Job Description P0A705 Confidence 97.56% Date Thu Jan 5 11:04:22 GMT 2012 Rank 284 Aligned Residues 214 % Identity 15% Template c1zu4A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ftsy; PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212 Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.							.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		T	V	G	E	L	A	N	K	M	A	V	K	G	S	Q	V	I	K	A	M	M	K	L	G	A	M	A	T	I	N	Q	V	I	D	Q	E	T	A	Q	L	V	A	E	E	M	G	H	K	V	I	L	.	.	.	.	.	.	R	R	E	N	E	L	E	E	A	V	M	S	D	R	D	T	G	A	A	A	E	P	R
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	K	K	L	S	K	K	Y	K	Q	A	D	D	E	F	F	E	E	L	E	D	V	L	I	Q	T	D	M	G	M	K	M	V	L	K	V	S	N	L	V	R	K	K	T	K	R	D	T	S	F	E	N	I	K	D	A	L	V	E	S	L	Y	Q	A	Y	T	D	N	D	W	Y	R	I	D	F	K	E	N	R
Template Known Secondary structure									T					S														T	T																			T	T																					S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.					.	.	.	.	430	.
Predicted Secondary structure																																					.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	.	.	.	.	Q	H	I	G	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	I	F	M	L	V	G	V	N	G	T	G	K	T	T	S	L	A	K	M	A	N	Y	Y	A	E	L	G	Y	K	V	L	I	A	A	A	D	T	F	R	A	G	A	T	Q	Q	L	E	E	W	I	K	T	R	L	N	N	K	V	D	L	V	K	A	N	K	L	N	A	D	P	A	S	V	V	F	D	A	I
Template Known Secondary structure									S	S	T	T	S	S															T	T											S													T	T	T	S		T	T							S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
			432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.													.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	.	.	.	.	.	.	.	.	.	.	.	.	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N
Query Conservation		.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation																																																										.	.
Template Sequence		K	K	A	K	E	Q	N	Y	D	L	L	L	I	D	T	A	G	R	L	Q	N	K	T	N	L	M	A	E	L	E	K	M	N	K	I	I	Q	Q	V	E	K	S	A	P	H	E	V	L	L	V	I	D	A	T	T	G	.	.	Q	N	G	V	I	Q	A	E	E	F	S	K	V	A	D	V	S	G	I	I	L	T
Template Known Secondary structure							T	T		S										G	G	G																	T	T		T	T			S								G	G	G	T	.	.											T	T	T	S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L
Query Conservation
Alig confidence						.																.	.	.	.	.	.	.	.	.								.	.
Template Conservation						.																.	.	.	.	.	.	.	.	.								.	.
Template Sequence		K	M	D	S	.	T	S	K	G	G	I	G	L	A	I	K	E	L	L	N	.	.	.	.	.	.	.	.	.	I	P	I	K	M	I	G	.	.	V	G	E	K	V	D	D	L
Template Known Secondary structure			G	G	G	.		S		T	T											.	.	.	.	.	.	.	.	.								.	.		S	S	S	T	T
Template Predicted Secondary structure						.																.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		354	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.										.	.	.	.	.	.	.			380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions