Job Description P0A705 Confidence 98.66% Date Thu Jan 5 11:04:22 GMT 2012 Rank 200 Aligned Residues 150 % Identity 17% Template c1zbdA_ PDB info PDB header:g protein Chain: A: PDB Molecule:rabphilin-3a; PDBTitle: structural basis of rab effector specificity: crystal2 structure of the small g protein rab3a complexed with the3 effector domain of rabphilin-3a Resolution 2.60 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	.	.	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		I	L	I	I	G	N	S	S	V	G	K	T	S	F	L	F	R	Y	A	D	D	S	F	T	P	A	F	V	S	T	V	G	I	D	F	K	V	K	T	I	Y	R	N	D	K	R	I	K	L	Q	I	W	D	T	A	G	L	E	R	Y	R	T	I	T	T	A	Y	Y	R	G	A	X	G	F	I	L	X	Y	D	I
Template Known Secondary structure							S	T	T	S	S										T					S							S											T	T													S	G	G	G						T	T	G	G	G		S								T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.					.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.				.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																	.	.	.	.																					.	.	.
Query SS confidence																	.	.	.	.																					.	.	.
Query Sequence		D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	.	.	.	.	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	.	.	.	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L
Query Conservation																	.	.	.	.																					.	.	.
Alig confidence																	.	.	.	.																					.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.
Template Sequence		T	N	E	E	S	F	N	A	V	Q	D	W	S	T	Q	I	K	T	Y	S	W	D	N	A	Q	V	L	L	V	G	N	K	C	D	X	E	D	E	R	V	V	S	S	E	R	G	R	Q	L	A	D	H	L	G	.	.	.	.	.	.	.	.	.	F	E	F	F	E	A	S	A	K	D	N	I	N	V	K	Q	T
Template Known Secondary structure		T																			S		S	S										T	T		T	T	S			S													T	.	.	.	.	.	.	.	.	.							B	T	T	T	T	B	S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.										.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		545	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	I	L	L	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	R	L	V	D	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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