Job Description P0A705 Confidence 98.63% Date Thu Jan 5 11:04:22 GMT 2012 Rank 210 Aligned Residues 150 % Identity 19% Template c1z06A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ras-related protein rab-33b; PDBTitle: gppnhp-bound rab33 gtpase Resolution 1.81 Å

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		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.			.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.																.
Query SS confidence																																																			.	.																.
Query Sequence		R	A	P	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	.	.	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	.	M	R	A	R	G	A	Q	A	T	D	I	V	V
Query Conservation																																																			.	.																.
Alig confidence																																																			.	.																.
Template Conservation
Template Sequence		R	I	F	K	I	I	V	I	G	D	S	N	V	G	K	T	C	L	T	Y	R	F	C	A	G	R	F	P	D	R	T	E	A	T	I	G	V	D	F	R	E	R	A	V	D	I	D	G	E	R	I	K	I	Q	L	W	D	T	A	G	Q	E	R	F	R	K	S	M	V	Q	H	Y	Y	R	N	V	H	A	V	V
Template Known Secondary structure												T	T	S	S											S	S			S	S						S											T	T													S					T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.						.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.				.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.																			.	.	.
Query SS confidence																								.	.	.	.	.																			.	.	.
Query Sequence		L	V	V	A	A	D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	.	.	.	.	.	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	.	.	.	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G
Query Conservation																								.	.	.	.	.																			.	.	.
Alig confidence																								.	.	.	.	.																			.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.
Template Sequence		F	V	Y	D	M	T	N	M	A	S	F	H	S	L	P	A	W	I	E	E	C	K	Q	H	L	L	A	N	D	I	P	R	I	L	V	G	N	K	C	D	L	R	S	A	I	Q	V	P	T	D	L	A	Q	K	F	A	D	T	H	S	.	.	.	.	.	.	.	.	.	M	P	L	F	E	T	S	A	K	N	P
Template Known Secondary structure						T	T							T															S											T	T		G	G	G			S												T	T	.	.	.	.	.	.	.	.	.								S	S	S	G
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.										.	.	.	.	.	.	.	.	180	.	.
		539				540	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		T	.	.	.	G	I	D	E	L	L	D	A	I
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		N	D	N	D	H	V	E	A	I	F	M	T	L
Template Known Secondary structure		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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