Job Description P0A705 Confidence 99.59% Date Thu Jan 5 11:04:22 GMT 2012 Rank 56 Aligned Residues 149 % Identity 21% Template c1xzqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable trna modification gtpase trme; PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf Resolution 2.90 Å

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		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.										.	.	.	.	.	.	.
Predicted Secondary structure																															.																																			.	.	.	.	.	.	.	.	.
Query SS confidence																															.																																			.	.	.	.	.	.	.	.	.
Query Sequence		R	A	P	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	S	T	K	V	A	S	.	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	.	.	.	.	.	.	.	.	.	S	M	R	A	R	G	A
Query Conservation																															.																																			.	.	.	.	.	.	.	.	.
Alig confidence																															.																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	L	R	M	V	I	V	G	K	P	N	V	G	K	S	T	L	L	N	R	L	L	N	E	D	R	A	I	V	T	D	I	P	G	T	T	R	D	V	I	S	E	E	I	V	I	R	G	I	L	F	R	I	V	D	T	A	G	V	R	S	E	T	N	D	L	V	E	R	L	G	I	E	R	T	L	Q	E	I
Template Known Secondary structure												T	T	G	G	G	S										T	B										S			S								T	T								S	S				S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	T	D	I	V	V	L	V	V	A	A	D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T
Query Conservation
Alig confidence																													.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																													.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		E	K	A	D	I	V	L	F	V	L	D	A	S	S	P	L	D	E	E	D	R	K	I	L	E	R	I	.	.	K	N	K	R	Y	L	V	V	I	N	K	V	D	V	V	E	K	I	N	E	E	E	I	K	N	K	.	.	.	.	.	.	.	.	.	L	G	T	D	R	H	M	V	K	I	S	A	L	K	G	E
Template Known Secondary structure					S								S	S	S													G	.	.	G	G	S	S									S	S				S									.	.	.	.	.	.	.	.	.	T	S		S	T	T						T	T	T	T
Template Predicted Secondary structure																													.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.										.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	E	L	L	D	A	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	E	K	L	E	E	S	I	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions