Job Description P0A705 Confidence 97.05% Date Thu Jan 5 11:04:22 GMT 2012 Rank 303 Aligned Residues 141 % Identity 16% Template c1tndA_ PDB info PDB header:binding protein(gtp) Chain: A: PDB Molecule:transducin; PDBTitle: the 2.2 angstroms crystal structure of transducin-alpha complexed with2 gtp gamma s Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		408	.	410	.	.	.	.	.	.	.	.	.	420						.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure															.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Query Sequence		L	D	Y	I	R	S	T	K	V	A	S	G	E	.	.	.	.	.	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D	D	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	R	L	V	T	P	G	Y	V	P	T	E	Q	D	V	L	R	S	R	V	K	T	T	G	I	I	E	T	Q	F	S	F	K	D	L	N	F	R	M	F	D	V	G	G	Q	R	S	E	R	K	K	W	I	H	C	F	E	G	V	T	C	I	I	F	I	A	A	L	S	A	Y	D	M	V	L	V	E	D	D
Template Known Secondary structure						T	S	T	T																	S									T	T											S					G	G	G	G	G	G		T	T		S								G	G	G	G	G		B		S	S		T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
				474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490					.	.	.	.	.	.	.	.	.	500	.	.																			.	.	.	.	.	.	.	510	.	.	.	.	.	.	.			.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																		.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.																		.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	.	.	.	.	V	P	V	V	V	A	V	N	K	I	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	.	.	G	I	L	P	E	E	W	G	G	E
Query Conservation		.	.																		.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.																		.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		E	V	N	R	M	H	E	S	L	H	L	F	N	S	I	C	N	H	R	Y	F	A	T	T	S	I	V	L	F	L	N	K	K	D	V	F	S	E	K	I	K	K	A	H	L	S	I	C	F	P	D	Y	N	G	P	N	T	Y	E	D	A	G	N	Y	I	K	V	Q	F	L	E	L	N	M	R	R	D	V	K	E
Template Known Secondary structure		T	S	B														T		S	G	G	G	S																		T	T	S		G	G	G	T		T	T			S																	T	T		T	T	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L	L	D	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	S	H	M	T	C	A	T	D	T	Q	N	V	K	F	V	F	D	A	V
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions