Job Description P0A705 Confidence 100.00% Date Thu Jan 5 11:04:22 GMT 2012 Rank 17 Aligned Residues 234 % Identity 24% Template c1g7cA_ PDB info PDB header:translation Chain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.																																.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	D	Y	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	V	I	G	H	V	D	S	G	K	S	T	T	T	G	H	L	I	Y	K	C	G	G	I	D	K	R	T	I	E	K	F	E	K	E	A	A	E	L	G	K	G	S	F	K	Y	A	W	V	L	D	K	L	K	A	E	R	E	R	G	I	T	I	D	I	A	L	W	K	F	E	T	P	K	Y	Q	V	T	V
Template Known Secondary structure								T	T	S														S		S	S											G	G	G	G	S	S	S																		T				S		S							S	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.								.	.	480	.	.	.	.	.	.	.	.	.	490	.	.		.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.				510	.
Predicted Secondary structure																																					.	.	.	.	.	.	.																.																		.	.	.
Query SS confidence																																					.	.	.	.	.	.	.																.																		.	.	.
Query Sequence		L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D	D	G	V	M	P	.	.	.	.	.	.	.	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	.	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	.	.	.	V	K
Query Conservation																																					.	.	.	.	.	.	.																.																		.	.	.
Alig confidence																																					.	.	.	.	.	.	.																.																		.	.	.
Template Conservation
Template Sequence		I	D	A	P	G	H	R	D	F	I	K	N	M	I	T	G	T	S	Q	A	D	C	A	I	L	I	I	A	G	G	V	G	E	F	E	A	G	I	S	K	D	G	Q	T	R	E	H	A	L	L	A	F	T	L	G	V	R	Q	L	I	V	A	V	N	K	M	D	S	V	K	W	D	E	S	R	F	Q	E	I	V
Template Known Secondary structure								T	T								S	S	S			S									S								T		T	T													T	T											T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.																						.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	L	L	Q	A	E	V	L	E	L	K	A	V	R	K	G	M	A	S	G	A	V	I
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	T	S	N	F	I	K	K	V	G	Y	N	P	K	T	V	P	F	V	P	I	S	G	W	N	G	D	N	M	I	E	A	T	T	N	A	P	W	Y	K	G	W	E	K	E	T	K	A	G	V	V	K	G	K	T	L	L	E	A	I	D	A	I	E	Q	P	S	R	P	T	D	K	P	L	R	L	P	L	Q
Template Known Secondary structure												T			G	G	G								T	T	T		B	T	T	T	B			S	S		T	T									S	S						S	S							T	S						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.			.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		E	S	F	L	D	K	G	R	G	P	V	A	T	V	L	V	R	E	G	T	L	H	K	G	D	I	V	L	C	G	F	E	Y	G	.	.	R	V	R	A	M	R	N	E	L	G	Q	E	V	L	E	A	G	P	S	I	P	V	E	I
Query Conservation																																				.	.
Alig confidence																																				.	.										.
Template Conservation																																															.
Template Sequence		D	V	Y	K	I	G	G	I	G	T	V	P	V	G	R	V	E	T	G	V	I	K	P	G	M	V	V	T	F	A	P	A	G	V	T	T	E	V	K	S	V	E	M	H	H	.	E	Q	L	E	Q	G	V	P	G	D	N	V	G	F
Template Known Secondary structure							T	T	T										B	S		B		T	T							T	T	T											T	T	.				S		B		T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions