Return to main results Retrieve Phyre Job Id

Job DescriptionP0A705
Confidence99.63%DateThu Jan 5 11:04:22 GMT 2012
Rank50Aligned Residues170
% Identity18%Templatec1egaB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein (gtp-binding protein era); PDBTitle: crystal structure of a widely conserved gtpase era
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   388.390.........400.........410........ .420.........430.........440.........450.........460...
Predicted Secondary structure 















.
















...
Query SS confidence 






























.












































. . .
Query Sequence  EPRAPVVTIMGHVDHGKTSLLDYIRSTKVAS. GEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATD. . .
Query Conservation          
 







 
 
         . 
  



                 




  
      
    
...
Alig confidence 






























.












































...
Template Conservation 
  

 




 









 
 
  
  

    


            

   



                   
Template Sequence  KSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASS
Template Known Secondary structure 


SSSSST
S




S

SS
TTSSSS

T

TTS
Template Predicted Secondary structure 

































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   464.....470.........480.........490.........500.........510.........520.........530........
Predicted Secondary structure  .....































Query SS confidence  . . . . .










































































Query Sequence  . . . . . IVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAG
Query Conservation  .....   


    
   

 
            

  

 
                             
  

  
Alig confidence  .....






















































.....














Template Conservation                                   
 


 




                .....      

 


  
Template Sequence  SIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLAS. . . . . QMNFLDIVPISAETG
Template Known Secondary structure 



TT


SSSS
SGGG
S
TT.....TS

S
TTTT
Template Predicted Secondary structure 




































.....









Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.... .....150.........
 
   539540.........550.........560..
Predicted Secondary structure 










Query SS confidence 























Query Sequence  TGIDELLDAILLQAEVLELKAVRK
Query Conservation       
                  
Alig confidence 























Template Conservation   

  
   
   

         
Template Sequence  LNVDTIAAIVRKHLPEATHHFPED
Template Known Secondary structure  TTT

B


SS
TT
Template Predicted Secondary structure 












Template SS confidence 























   160.........170.........180...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions