Job Description P39358 Confidence 16.52% Date Thu Jan 5 11:59:48 GMT 2012 Rank 77 Aligned Residues 123 % Identity 13% Template d1vi4a_ SCOP info The "swivelling" beta/beta/alpha domain RraA-like RraA-like Resolution 1.87

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		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		T	S	T	I	T	F	P	V	G	N	I	A	P	E	G	S	V	I	K	S	T	A	I	D	P	S	M	I	D	E	Q	G	I	Y	Y	H	K	G	V	A	K	V	Y	L	S	E	K	S	A	I	Y	D	I	K	H	D	K	I	K	A	G	D	I	L	V	I	I	G	V	G	P	S	G	T	.	G	M	E	E	T
Query Conservation																																																																												.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.																		.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		E	S	Q	V	T	L	L	N	L	P	L	Q	N	F	G	Q	R	S	A	F	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	V	T	V	R	C	Y	H	D	N	S	K	V	R	D	V	L	S	Q	.	.	N	G	K	G	K	V	L	V	V	D	G	H	G	S	C	H	K	A	L	X	G	D	Q
Template Known Secondary structure		G	G	G												S	S		S					.	.	.	.	.	.	.	.	.	.	.	.	.								S	S										T	S	.	.			T	T								T	T			S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.														.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		513	.	.	.	.	.	.	520	.	.							.	.	.	.	.	.									.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure												.	.	.	.	.	.							.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.							.	.	.	.	.	.	.	.
Query Sequence		Y	Q	V	T	S	A	L	K	H	L	.	.	.	.	.	.	S	Y	G	K	H	V	.	.	.	.	.	.	.	.	S	L	I	T	D	A	R	F	S	G	V	S	T	G	A	C	I	G	H	V	G	P	E	A	L	A	G	G	P	I	G	K	L	R	T	G	D	L	I	E	I	K	I	D	C
Query Conservation												.	.	.	.	.	.							.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.							.	.	.	.	.	.	.	.																													.	.
Template Conservation																																																												.	.
Template Sequence		L	A	I	L	A	I	K	N	D	W	E	G	V	I	I	Y	G	A	V	R	D	V	V	A	X	S	E	X	D	L	G	I	K	A	L	G	T	S	P	F	K	T	E	K	R	G	A	G	Q	V	N	V	T	L	T	X	Q	N	.	.	Q	I	V	E	P	G	D	Y	L	Y	A	D	W	N	G
Template Known Secondary structure									T	T																	T	T	S	S	S									S							S					S						T	T	.	.					T	T	S						T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions