Job Description P39358 Confidence 31.32% Date Thu Jan 5 11:59:48 GMT 2012 Rank 24 Aligned Residues 122 % Identity 13% Template d1nxja_ SCOP info The "swivelling" beta/beta/alpha domain RraA-like RraA-like Resolution 1.90

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		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		I	T	F	P	V	G	N	I	A	P	E	G	S	V	I	K	S	T	A	I	D	P	S	M	I	D	E	Q	G	I	Y	Y	H	K	G	V	A	K	V	Y	L	S	E	K	S	A	I	Y	D	I	K	H	D	K	I	K	A	G	D	I	L	V	I	I	G	V	G	P	S	G	T	.	G	M	E	E	T	Y	Q	V
Query Conservation																																																																									.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																				.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		V	R	S	C	D	L	Q	F	R	Q	F	G	G	R	S	Q	F	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	S	T	V	R	C	F	Q	D	N	A	L	L	K	S	V	L	.	.	S	Q	P	S	A	G	G	V	L	V	I	D	G	A	G	S	L	H	T	A	L	V	G	D	V	I	A	E
Template Known Secondary structure													S	S	B	S					.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	B									.	.		S			S	S								T	T			S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		516	.	.	.	520	.	.							.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.			.	.	.	.	.	560					.	.	.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																																	.	.							.	.	.	.
Query SS confidence									.	.	.	.	.	.																																	.	.							.	.	.	.
Query Sequence		T	S	A	L	K	H	L	.	.	.	.	.	.	S	Y	G	K	H	V	S	L	I	T	D	A	R	F	S	G	V	S	T	G	A	C	I	G	H	V	G	P	E	A	L	A	.	.	G	G	P	I	G	K	.	.	.	.	L	R	T	G	D	L	I	E	I	K	I	D	C
Query Conservation									.	.	.	.	.	.																																	.	.							.	.	.	.
Alig confidence									.	.	.	.	.	.																																	.	.							.	.	.	.
Template Conservation
Template Sequence		L	A	R	S	T	G	W	T	G	L	I	V	H	G	A	V	R	D	A	A	A	L	R	G	I	D	I	G	I	K	A	L	G	T	N	P	R	K	S	T	K	T	G	A	G	E	R	D	V	E	I	T	L	G	G	V	T	F	V	P	G	D	I	A	Y	S	D	D	D	G
Template Known Secondary structure							T											S						T	T	S	S	S										S	B		B		S			S			S						T	T					T	T	S						S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions