Job Description P39358 Confidence 15.14% Date Thu Jan 5 11:59:48 GMT 2012 Rank 92 Aligned Residues 48 % Identity 25% Template c3i18A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo2051 protein; PDBTitle: crystal structure of the pdz domain of the sdrc-like protein2 (lmo2051) from listeria monocytogenes, northeast structural3 genomics consortium target lmr166b Resolution 1.70 Å

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		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	G	A	C	I	G	H	V	G	P	E	A	L	A	G	G	P	I	G	K	L	R	T	G	D	L	I	E	I	K	I	D	C	R	E	L	H	G	E	V	N	F	L	G	T	R	S	D	E	Q	L	P	S	Q	E	E	A	T	A	I	L	N	A	R	P	S
Query Conservation
Alig confidence																				.	.	.								.									.	.	.	.		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.								.									.	.	.	.		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	G	V	Y	V	X	S	V	K	D	D	V	P	A	A	D	V	.	.	.	L	H	A	G	D	L	I	.	T	E	I	D	G	N	A	F	.	.	.	.	K	.	.	.	.	.	.	.	.	.	.	.	S	S	Q	E	F	I	D	Y	I	H	S	K	K	V
Template Known Secondary structure												T	T	S	G	G	G	G	T	.	.	.			T	T				.				T	T	B			.	.	.	.	S	.	.	.	.	.	.	.	.	.	.	.	S										T	S		T
Template Predicted Secondary structure																				.	.	.								.									.	.	.	.		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30		.	.	.	.	.	.	.	.					.												40	.	.	.	.	.	.	.	.	.	50	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions