Job Description P39358 Confidence 17.45% Date Thu Jan 5 11:59:48 GMT 2012 Rank 68 Aligned Residues 66 % Identity 18% Template c3fijD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 Resolution 2.30 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	A	T	V	L	V	P	G	G	A	T	L	P	A	K	D	G	E	D	N	G	K	V	Q	T	I	G	A	R	F	A	N	G	E	L	S	L	Q	D	A	R	R	A	G	C	K	A	C	A	S	S	G	G	G	C	Q	F	L	G	T	A	G	T	S	Q	V	V	A	E	G	L	G
Query Conservation
Alig confidence																																																					.							.	.	.	.	.	.
Template Conservation																																																					.							.	.	.	.	.	.
Template Sequence		L	V	D	G	L	L	L	T	G	G	Q	D	I	T	P	Q	L	Y	L	E	E	P	S	Q	E	I	G	A	Y	F	P	P	R	D	S	Y	E	I	A	L	V	R	A	A	L	D	A	G	K	P	I	.	F	A	I	C	R	G	.	.	.	.	.	.	X	Q	L	V	N	V	A	L	G
Template Known Secondary structure		T		S								S				G	G	G	G	T					T	T																							T				.				T			.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																																					.							.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.							.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions