Job Description P39358 Confidence 19.94% Date Thu Jan 5 11:59:48 GMT 2012 Rank 57 Aligned Residues 28 % Identity 54% Template c2joaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:serine protease htra1; PDBTitle: htra1 bound to an optimized peptide: nmr assignment of pdz2 domain and ligand resonances Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.			.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		F	S	G	V	S	T	G	A	C	I	G	H	V	G	P	E	.	.	A	L	A	G	G	P	I	G	K	L	R	T	G	D	L	I
Query Conservation																		.	.
Alig confidence																		.	.						.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		F	P	D	V	I	S	G	A	Y	I	I	E	V	I	P	D	T	P	A	E	A	G	G	.	.	.	.	L	K	E	N	D	V	I
Template Known Secondary structure		S		S				S								S	S	S						T	.	.	.	.			T	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.					.	.	430	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions