Job Description P39358 Confidence 100.00% Date Thu Jan 5 11:59:48 GMT 2012 Rank 1 Aligned Residues 470 % Identity 28% Template c2gp4A_ PDB info PDB header:lyase Chain: A: PDB Molecule:6-phosphogluconate dehydratase; PDBTitle: structure of [fes]cluster-free apo form of 6-phosphogluconate2 dehydratase from shewanella oneidensis Resolution 2.49 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		K	A	N	H	A	L	P	Y	A	V	Y	V	S	D	P	C	D	G	R	T	Q	G	T	T	G	M	F	D	S	L	P	Y	R	N	D	A	S	M	V	M	R	R	L	I	R	S	L	P	D	A	K	A	V	I	G	V	A	S	C	D	K	G	L	P	A	T	M	M	A	L	A	A	Q	H	.	N	I	A	T	V
Query Conservation																																																																												.
Alig confidence															.	.																																.																							.					.
Template Conservation															.	.																																.																							.
Template Sequence		Q	E	V	G	S	V	A	Q	V	A	G	V	P	.	.	C	D	G	V	T	Q	G	Q	P	G	X	E	L	S	L	L	S	R	E	V	I	A	X	A	T	A	V	G	L	S	H	.	N	X	F	D	G	A	L	L	L	G	I	C	D	K	I	V	P	G	L	L	I	G	.	A	L	S	F	G	H	L	P	X	L
Template Known Secondary structure													B		.	.							S	S	S	G	G	G	G																	T	T	.				S								S	T	T	T	T							.			T	T	T	T	S
Template Predicted Secondary structure															.	.																																.																							.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	G	G	A	T	L	P	A	K	D	G	E	D	N	G	K	V	Q	T	I	G	A	R	F	A	N	G	E	L	S	L	Q	D	A	R	R	A	G	C	K	A	C	A	S	S	G	G	G	C	Q	F	L	G	T	A	G	T	S	Q	V	V	A	E	G	L	G	L	A	I	P	H	S	A	L	A	P	S	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.												.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.												.	.	.	.	.
Template Sequence		F	V	P	A	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	V	D	R	A	Q	L	L	E	A	E	A	Q	S	Y	H	S	A	.	G	T	C	T	F	Y	G	Q	L	X	L	.	.	.	.	.	E	V	X	G	L	Q	L	P	G	S	S	F	V	N	P	D
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T								T	T	S	S						.												.	.	.	.	.			T	T		S		T	T	G	G	G	S		T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.												.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180																							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		E	P	V	W	R	E	I	A	R	A	S	A	R	A	A	L	N	L	S	Q	K	G	I	T	T	R	.	.	.	E	I	L	T	D	K	A	I	E	N	A	M	T	V	H	A	A	F	G	G	S	T	N	L	L	L	H	I	P	A	I	A	H	Q	A	G	C	H	I	P	T	V	D	D	W	I	R	I	N	K	R
Query Conservation																												.	.	.
Alig confidence																												.	.	.																																								.
Template Conservation																																																																						.
Template Sequence		D	P	L	R	E	A	L	N	K	X	A	A	K	Q	V	C	R	L	T	E	L	G	T	Q	Y	S	P	I	G	E	V	V	N	E	K	S	I	V	N	G	I	V	A	L	L	A	T	G	G	S	T	N	L	T	X	H	I	V	A	A	A	R	A	A	G	I	I	V	.	N	W	D	D	F	S	E	L	S	D	A
Template Known Secondary structure																			T	S	T	T	S	S	S								S	S														T	T			T													T	T				.										T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.				410	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		V	P	R	L	V	S	V	L	P	N	G	P	V	Y	H	P	T	V	N	A	F	M	A	G	G	V	P	E	V	M	L	H	L	R	S	L	G	L	L	H	E	D	V	M	T	V	T	G	S	T	L	K	E	N	L	D	W	W	E	H	S	E	R	R	Q	R	F	K	Q	L	.	.	.	L	L	D	Q	E	Q	I
Query Conservation																																																																								.	.	.
Alig confidence														.	.																																																									.	.	.
Template Conservation														.	.
Template Sequence		V	P	L	L	A	R	V	Y	P	N	G	H	.	.	A	D	I	N	H	F	H	A	A	G	G	X	A	F	L	I	K	E	L	L	D	A	G	L	L	H	E	D	V	N	T	V	A	G	Y	G	L	R	R	Y	T	Q	E	P	K	L	L	D	G	E	L	R	W	V	D	G	P	T	V	S	L	D	T	E	V	L
Template Known Secondary structure				B		B			G	G	G	S	S	.	.										T													T		S							T	T				G	G	G	G	G							T	T									S	S		S		T	T	T	B
Template Predicted Secondary structure														.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	D	E	V	I	M	S	P	Q	Q	A	K	A	R	G	L	T	S	T	I	T	F	P	V	G	N	I	A	P	E	G	S	V	I	K	S	T	A	I	D	P	S	M	I	D	E	Q	G	I	Y	Y	H	K	G	V	A	K	V	Y	L	S	E	K	S	A	I	Y	D	I	K	H	D	K	I	K	A	G	D	I
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.													.	.													.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.													.	.													.	.	.	.	.	.
Template Sequence		T	S	V	A	T	P	F	Q	N	N	.	.	.	.	.	.	.	.	G	G	L	K	L	L	K	G	N	L	G	R	.	.	A	V	I	K	V	S	A	V	Q	P	Q	H	.	.	.	.	.	.	R	V	V	E	A	P	A	V	V	I	D	D	Q	N	K	L	D	A	L	F	K	S	G	A	L	D	R	D	C	V
Template Known Secondary structure				S	S	S		S	B	S	S	.	.	.	.	.	.	.	.									T	T			.	.						T	T	S		G	G	G	.	.	.	.	.	.	S										S	S	G	G	G							T	T	T	T	S	S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.													.	.													.	.	.	.	.	.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.									.	.	420	.	.	.	.	.	.	.	.	.			430	.	.	.	.	.	.	.	.	.	440	.							.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.		.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.		.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure																												.																					.
Query SS confidence																												.																					.
Query Sequence		L	V	I	I	G	V	G	P	S	G	T	G	M	E	E	T	Y	Q	V	T	S	A	L	K	H	L	.	S	Y	G	K	H	V	S	L	I	T	D	A	R	F	S	G	V	S	T	G	.	A	C	I	G	H	V	G	P	E	A	L	A	G	G	P	I	G	K	L	R	T	G	D	L	I	E	I	K	I	D	C	R
Query Conservation																												.																					.
Alig confidence																												.																					.
Template Conservation
Template Sequence		V	V	V	K	G	Q	G	P	K	A	N	G	X	P	E	L	H	K	L	T	P	L	L	G	S	L	Q	D	K	G	F	K	V	A	L	X	T	D	G	R	X	S	G	A	S	G	K	V	P	A	A	I	H	L	T	P	E	A	I	D	G	G	L	I	A	K	V	Q	D	G	D	L	I	R	V	D	A	L	T	G
Template Known Secondary structure						S		S					S			B			S	S										T	T								S	S	B		S	S	S			S	S								S		G	G	G	T		G	G	G	T			T	T							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	H	G	E	V	N	F	L	G	T	R	S	D	E	Q	L	P	S	Q	E	E	A	T	A	I	L	N	A	R	P	S	H	Q	D	L	L	P	D	P	E	L	P	D	D	T	R	L	W	A	M	L	Q	A	V	S	G	G	T	W	T	G	C	I	Y	D
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		E	L	S	L	L	V	.	.	.	.	.	.	.	.	.	.	.	.	S	D	T	E	L	A	T	R	T	A	T	E	I	D	.	.	.	.	L	R	H	S	R	Y	G	X	G	R	E	L	F	G	V	L	R	S	N	L	S	S	P	E	T	G	A	R	S	T
Template Known Secondary structure							S	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.		G	G	G	S	S	S	T	T	G	G	G	S						T				G	G	G	T	S			S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		552	.	.	.	.	.													.	.	560	.	.	.	.	.	.	.	.	.	570	.					.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.